Mercurial > repos > iuc > circos

comparison karyotype-from-fasta.py @ 8:e6cbe3190642 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit cc96dd4a8aef7d0b6d3057024af0344ab8a9410f"
author iuc
date Fri, 12 Jun 2020 10:39:58 -0400
parents 4b519282a05b
children
comparison
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7:4b519282a05b 8:e6cbe3190642
1 #!/usr/bin/env python 1 #!/usr/bin/env python
2 import sys 2 import sys
3
3 from Bio import SeqIO 4 from Bio import SeqIO
4 5
5 6
6 # Process fasta data, extracting only headers 7 # Process fasta data, extracting only headers
7 for idx, seq in enumerate(SeqIO.parse(sys.argv[1], "fasta")): 8 for idx, seq in enumerate(SeqIO.parse(sys.argv[1], "fasta")):