Mercurial > repos > iuc > circos

diff macros_tests.xml @ 2:014a21767ac4 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
author iuc
date Tue, 17 Sep 2019 16:54:57 -0400
parents
children 740057a5126d
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/macros_tests.xml	Tue Sep 17 16:54:57 2019 -0400
@@ -0,0 +1,91 @@
+<?xml version="1.0"?>
+<macros>
+    <xml name="test_cases">
+        <tests>
+            <test>
+                <section name="reference_genome">
+                    <conditional name="ref">
+                        <param name="ref_source" value="history" />
+                        <param name="genome_fasta" value="1/input.fa" />
+                    </conditional>
+                </section>
+
+                <section name="outputs">
+                    <param name="png" value="yes" />
+                    <param name="svg" value="yes" />
+                </section>
+
+                <output name="output_png" file="0/out.png" compare="sim_size" delta="15000" ftype="png"/>
+                <output name="output_svg" file="0/out.svg" compare="sim_size" delta="15000" ftype="svg"/>
+            </test>
+            <test>
+                <section name="reference_genome">
+                    <conditional name="ref">
+                        <param name="ref_source" value="history" />
+                        <param name="genome_fasta" value="1/input.fa" />
+                    </conditional>
+                </section>
+
+                <section name="outputs">
+                    <param name="svg" value="yes" />
+                </section>
+
+                <section name="ticks">
+                    <param name="show_ticks" value="yes" />
+
+                    <repeat name="tick_group">
+                        <param name="spacing" value="5000" />
+                    </repeat>
+                    <repeat name="tick_group">
+                        <param name="spacing" value="20000" />
+                        <conditional name="ticks">
+                            <param name="show_tick_labels" value="yes" />
+                            <param name="format" value="%.1f" />
+                        </conditional>
+                    </repeat>
+                </section>
+
+                <section name="sec_tdd">
+                    <repeat name="data">
+                        <param name="r0" value="0.8" />
+                        <param name="r1" value="0.9" />
+                        <conditional name="plot_format">
+                            <param name="plot_format_select" value="histogram" />
+                            <param name="data_source" value="1/sine.tab" />
+                        </conditional>
+                    </repeat>
+                    <repeat name="data">
+                        <param name="r0" value="0.7" />
+                        <param name="r1" value="0.8" />
+                        <conditional name="plot_format">
+                            <param name="plot_format_select" value="scatter" />
+                            <param name="data_source" value="1/sine.tab" />
+                        </conditional>
+                    </repeat>
+                    <repeat name="data">
+                        <param name="r0" value="0.6" />
+                        <param name="r1" value="0.7" />
+                        <conditional name="plot_format">
+                            <param name="plot_format_select" value="tile" />
+                            <param name="data_source" value="1/tiles.bed" />
+                        </conditional>
+                    </repeat>
+                </section>
+
+                <section name="sec_links">
+                    <repeat name="data">
+                        <param name="radius" value="0.59" />
+                        <param name="data_source" value="1/links.txt"/>
+                        <conditional name="linktype">
+                            <param name="ribbon" value="yes" />
+                        </conditional>
+                    </repeat>
+                </section>
+
+                <!-- Outputs -->
+                <output name="output_png" file="1/out.png" compare="sim_size" delta="15000" ftype="png"/>
+                <output name="output_svg" file="1/out.svg" compare="sim_size" delta="15000" ftype="svg"/>
+            </test>
+        </tests>
+    </xml>
+</macros>