Mercurial > repos > iuc > circos
view karyotype/karyotype.human.hg19.txt @ 9:df7356989ac1 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 041a4d1618298f540e3917f00781e09ec7d71b75"
author | iuc |
---|---|
date | Mon, 23 Nov 2020 10:56:29 +0000 |
parents | 740057a5126d |
children |
line wrap: on
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chr - hs1 1 0 249250621 chr1 chr - hs2 2 0 243199373 chr2 chr - hs3 3 0 198022430 chr3 chr - hs4 4 0 191154276 chr4 chr - hs5 5 0 180915260 chr5 chr - hs6 6 0 171115067 chr6 chr - hs7 7 0 159138663 chr7 chr - hs8 8 0 146364022 chr8 chr - hs9 9 0 141213431 chr9 chr - hs10 10 0 135534747 chr10 chr - hs11 11 0 135006516 chr11 chr - hs12 12 0 133851895 chr12 chr - hs13 13 0 115169878 chr13 chr - hs14 14 0 107349540 chr14 chr - hs15 15 0 102531392 chr15 chr - hs16 16 0 90354753 chr16 chr - hs17 17 0 81195210 chr17 chr - hs18 18 0 78077248 chr18 chr - hs19 19 0 59128983 chr19 chr - hs20 20 0 63025520 chr20 chr - hs21 21 0 48129895 chr21 chr - hs22 22 0 51304566 chr22 chr - hsX x 0 155270560 chrx chr - hsY y 0 59373566 chry band hs1 p36.33 p36.33 0 2300000 gneg band hs1 p36.32 p36.32 2300000 5400000 gpos25 band hs1 p36.31 p36.31 5400000 7200000 gneg band hs1 p36.23 p36.23 7200000 9200000 gpos25 band hs1 p36.22 p36.22 9200000 12700000 gneg band hs1 p36.21 p36.21 12700000 16200000 gpos50 band hs1 p36.13 p36.13 16200000 20400000 gneg band hs1 p36.12 p36.12 20400000 23900000 gpos25 band hs1 p36.11 p36.11 23900000 28000000 gneg band hs1 p35.3 p35.3 28000000 30200000 gpos25 band hs1 p35.2 p35.2 30200000 32400000 gneg band hs1 p35.1 p35.1 32400000 34600000 gpos25 band hs1 p34.3 p34.3 34600000 40100000 gneg band hs1 p34.2 p34.2 40100000 44100000 gpos25 band hs1 p34.1 p34.1 44100000 46800000 gneg band hs1 p33 p33 46800000 50700000 gpos75 band hs1 p32.3 p32.3 50700000 56100000 gneg band hs1 p32.2 p32.2 56100000 59000000 gpos50 band hs1 p32.1 p32.1 59000000 61300000 gneg band hs1 p31.3 p31.3 61300000 68900000 gpos50 band hs1 p31.2 p31.2 68900000 69700000 gneg band hs1 p31.1 p31.1 69700000 84900000 gpos100 band hs1 p22.3 p22.3 84900000 88400000 gneg band hs1 p22.2 p22.2 88400000 92000000 gpos75 band hs1 p22.1 p22.1 92000000 94700000 gneg band hs1 p21.3 p21.3 94700000 99700000 gpos75 band hs1 p21.2 p21.2 99700000 102200000 gneg band hs1 p21.1 p21.1 102200000 107200000 gpos100 band hs1 p13.3 p13.3 107200000 111800000 gneg band hs1 p13.2 p13.2 111800000 116100000 gpos50 band hs1 p13.1 p13.1 116100000 117800000 gneg band hs1 p12 p12 117800000 120600000 gpos50 band hs1 p11.2 p11.2 120600000 121500000 gneg band hs1 p11.1 p11.1 121500000 125000000 acen band hs1 q11 q11 125000000 128900000 acen band hs1 q12 q12 128900000 142600000 gvar band hs1 q21.1 q21.1 142600000 147000000 gneg band hs1 q21.2 q21.2 147000000 150300000 gpos50 band hs1 q21.3 q21.3 150300000 155000000 gneg band hs1 q22 q22 155000000 156500000 gpos50 band hs1 q23.1 q23.1 156500000 159100000 gneg band hs1 q23.2 q23.2 159100000 160500000 gpos50 band hs1 q23.3 q23.3 160500000 165500000 gneg band hs1 q24.1 q24.1 165500000 167200000 gpos50 band hs1 q24.2 q24.2 167200000 170900000 gneg band hs1 q24.3 q24.3 170900000 172900000 gpos75 band hs1 q25.1 q25.1 172900000 176000000 gneg band hs1 q25.2 q25.2 176000000 180300000 gpos50 band hs1 q25.3 q25.3 180300000 185800000 gneg band hs1 q31.1 q31.1 185800000 190800000 gpos100 band hs1 q31.2 q31.2 190800000 193800000 gneg band hs1 q31.3 q31.3 193800000 198700000 gpos100 band hs1 q32.1 q32.1 198700000 207200000 gneg band hs1 q32.2 q32.2 207200000 211500000 gpos25 band hs1 q32.3 q32.3 211500000 214500000 gneg band hs1 q41 q41 214500000 224100000 gpos100 band hs1 q42.11 q42.11 224100000 224600000 gneg band hs1 q42.12 q42.12 224600000 227000000 gpos25 band hs1 q42.13 q42.13 227000000 230700000 gneg band hs1 q42.2 q42.2 230700000 234700000 gpos50 band hs1 q42.3 q42.3 234700000 236600000 gneg band hs1 q43 q43 236600000 243700000 gpos75 band hs1 q44 q44 243700000 249250621 gneg band hs10 p15.3 p15.3 0 3000000 gneg band hs10 p15.2 p15.2 3000000 3800000 gpos25 band hs10 p15.1 p15.1 3800000 6600000 gneg band hs10 p14 p14 6600000 12200000 gpos75 band hs10 p13 p13 12200000 17300000 gneg band hs10 p12.33 p12.33 17300000 18600000 gpos75 band hs10 p12.32 p12.32 18600000 18700000 gneg band hs10 p12.31 p12.31 18700000 22600000 gpos75 band hs10 p12.2 p12.2 22600000 24600000 gneg band hs10 p12.1 p12.1 24600000 29600000 gpos50 band hs10 p11.23 p11.23 29600000 31300000 gneg band hs10 p11.22 p11.22 31300000 34400000 gpos25 band hs10 p11.21 p11.21 34400000 38000000 gneg band hs10 p11.1 p11.1 38000000 40200000 acen band hs10 q11.1 q11.1 40200000 42300000 acen band hs10 q11.21 q11.21 42300000 46100000 gneg band hs10 q11.22 q11.22 46100000 49900000 gpos25 band hs10 q11.23 q11.23 49900000 52900000 gneg band hs10 q21.1 q21.1 52900000 61200000 gpos100 band hs10 q21.2 q21.2 61200000 64500000 gneg band hs10 q21.3 q21.3 64500000 70600000 gpos100 band hs10 q22.1 q22.1 70600000 74900000 gneg band hs10 q22.2 q22.2 74900000 77700000 gpos50 band hs10 q22.3 q22.3 77700000 82000000 gneg band hs10 q23.1 q23.1 82000000 87900000 gpos100 band hs10 q23.2 q23.2 87900000 89500000 gneg band hs10 q23.31 q23.31 89500000 92900000 gpos75 band hs10 q23.32 q23.32 92900000 94100000 gneg band hs10 q23.33 q23.33 94100000 97000000 gpos50 band hs10 q24.1 q24.1 97000000 99300000 gneg band hs10 q24.2 q24.2 99300000 101900000 gpos50 band hs10 q24.31 q24.31 101900000 103000000 gneg band hs10 q24.32 q24.32 103000000 104900000 gpos25 band hs10 q24.33 q24.33 104900000 105800000 gneg band hs10 q25.1 q25.1 105800000 111900000 gpos100 band hs10 q25.2 q25.2 111900000 114900000 gneg band hs10 q25.3 q25.3 114900000 119100000 gpos75 band hs10 q26.11 q26.11 119100000 121700000 gneg band hs10 q26.12 q26.12 121700000 123100000 gpos50 band hs10 q26.13 q26.13 123100000 127500000 gneg band hs10 q26.2 q26.2 127500000 130600000 gpos50 band hs10 q26.3 q26.3 130600000 135534747 gneg band hs11 p15.5 p15.5 0 2800000 gneg band hs11 p15.4 p15.4 2800000 10700000 gpos50 band hs11 p15.3 p15.3 10700000 12700000 gneg band hs11 p15.2 p15.2 12700000 16200000 gpos50 band hs11 p15.1 p15.1 16200000 21700000 gneg band hs11 p14.3 p14.3 21700000 26100000 gpos100 band hs11 p14.2 p14.2 26100000 27200000 gneg band hs11 p14.1 p14.1 27200000 31000000 gpos75 band hs11 p13 p13 31000000 36400000 gneg band hs11 p12 p12 36400000 43500000 gpos100 band hs11 p11.2 p11.2 43500000 48800000 gneg band hs11 p11.12 p11.12 48800000 51600000 gpos75 band hs11 p11.11 p11.11 51600000 53700000 acen band hs11 q11 q11 53700000 55700000 acen band hs11 q12.1 q12.1 55700000 59900000 gpos75 band hs11 q12.2 q12.2 59900000 61700000 gneg band hs11 q12.3 q12.3 61700000 63400000 gpos25 band hs11 q13.1 q13.1 63400000 65900000 gneg band hs11 q13.2 q13.2 65900000 68400000 gpos25 band hs11 q13.3 q13.3 68400000 70400000 gneg band hs11 q13.4 q13.4 70400000 75200000 gpos50 band hs11 q13.5 q13.5 75200000 77100000 gneg band hs11 q14.1 q14.1 77100000 85600000 gpos100 band hs11 q14.2 q14.2 85600000 88300000 gneg band hs11 q14.3 q14.3 88300000 92800000 gpos100 band hs11 q21 q21 92800000 97200000 gneg band hs11 q22.1 q22.1 97200000 102100000 gpos100 band hs11 q22.2 q22.2 102100000 102900000 gneg band hs11 q22.3 q22.3 102900000 110400000 gpos100 band hs11 q23.1 q23.1 110400000 112500000 gneg band hs11 q23.2 q23.2 112500000 114500000 gpos50 band hs11 q23.3 q23.3 114500000 121200000 gneg band hs11 q24.1 q24.1 121200000 123900000 gpos50 band hs11 q24.2 q24.2 123900000 127800000 gneg band hs11 q24.3 q24.3 127800000 130800000 gpos50 band hs11 q25 q25 130800000 135006516 gneg band hs12 p13.33 p13.33 0 3300000 gneg band hs12 p13.32 p13.32 3300000 5400000 gpos25 band hs12 p13.31 p13.31 5400000 10100000 gneg band hs12 p13.2 p13.2 10100000 12800000 gpos75 band hs12 p13.1 p13.1 12800000 14800000 gneg band hs12 p12.3 p12.3 14800000 20000000 gpos100 band hs12 p12.2 p12.2 20000000 21300000 gneg band hs12 p12.1 p12.1 21300000 26500000 gpos100 band hs12 p11.23 p11.23 26500000 27800000 gneg band hs12 p11.22 p11.22 27800000 30700000 gpos50 band hs12 p11.21 p11.21 30700000 33300000 gneg band hs12 p11.1 p11.1 33300000 35800000 acen band hs12 q11 q11 35800000 38200000 acen band hs12 q12 q12 38200000 46400000 gpos100 band hs12 q13.11 q13.11 46400000 49100000 gneg band hs12 q13.12 q13.12 49100000 51500000 gpos25 band hs12 q13.13 q13.13 51500000 54900000 gneg band hs12 q13.2 q13.2 54900000 56600000 gpos25 band hs12 q13.3 q13.3 56600000 58100000 gneg band hs12 q14.1 q14.1 58100000 63100000 gpos75 band hs12 q14.2 q14.2 63100000 65100000 gneg band hs12 q14.3 q14.3 65100000 67700000 gpos50 band hs12 q15 q15 67700000 71500000 gneg band hs12 q21.1 q21.1 71500000 75700000 gpos75 band hs12 q21.2 q21.2 75700000 80300000 gneg band hs12 q21.31 q21.31 80300000 86700000 gpos100 band hs12 q21.32 q21.32 86700000 89000000 gneg band hs12 q21.33 q21.33 89000000 92600000 gpos100 band hs12 q22 q22 92600000 96200000 gneg band hs12 q23.1 q23.1 96200000 101600000 gpos75 band hs12 q23.2 q23.2 101600000 103800000 gneg band hs12 q23.3 q23.3 103800000 109000000 gpos50 band hs12 q24.11 q24.11 109000000 111700000 gneg band hs12 q24.12 q24.12 111700000 112300000 gpos25 band hs12 q24.13 q24.13 112300000 114300000 gneg band hs12 q24.21 q24.21 114300000 116800000 gpos50 band hs12 q24.22 q24.22 116800000 118100000 gneg band hs12 q24.23 q24.23 118100000 120700000 gpos50 band hs12 q24.31 q24.31 120700000 125900000 gneg band hs12 q24.32 q24.32 125900000 129300000 gpos50 band hs12 q24.33 q24.33 129300000 133851895 gneg band hs13 p13 p13 0 4500000 gvar band hs13 p12 p12 4500000 10000000 stalk band hs13 p11.2 p11.2 10000000 16300000 gvar band hs13 p11.1 p11.1 16300000 17900000 acen band hs13 q11 q11 17900000 19500000 acen band hs13 q12.11 q12.11 19500000 23300000 gneg band hs13 q12.12 q12.12 23300000 25500000 gpos25 band hs13 q12.13 q12.13 25500000 27800000 gneg band hs13 q12.2 q12.2 27800000 28900000 gpos25 band hs13 q12.3 q12.3 28900000 32200000 gneg band hs13 q13.1 q13.1 32200000 34000000 gpos50 band hs13 q13.2 q13.2 34000000 35500000 gneg band hs13 q13.3 q13.3 35500000 40100000 gpos75 band hs13 q14.11 q14.11 40100000 45200000 gneg band hs13 q14.12 q14.12 45200000 45800000 gpos25 band hs13 q14.13 q14.13 45800000 47300000 gneg band hs13 q14.2 q14.2 47300000 50900000 gpos50 band hs13 q14.3 q14.3 50900000 55300000 gneg band hs13 q21.1 q21.1 55300000 59600000 gpos100 band hs13 q21.2 q21.2 59600000 62300000 gneg band hs13 q21.31 q21.31 62300000 65700000 gpos75 band hs13 q21.32 q21.32 65700000 68600000 gneg band hs13 q21.33 q21.33 68600000 73300000 gpos100 band hs13 q22.1 q22.1 73300000 75400000 gneg band hs13 q22.2 q22.2 75400000 77200000 gpos50 band hs13 q22.3 q22.3 77200000 79000000 gneg band hs13 q31.1 q31.1 79000000 87700000 gpos100 band hs13 q31.2 q31.2 87700000 90000000 gneg band hs13 q31.3 q31.3 90000000 95000000 gpos100 band hs13 q32.1 q32.1 95000000 98200000 gneg band hs13 q32.2 q32.2 98200000 99300000 gpos25 band hs13 q32.3 q32.3 99300000 101700000 gneg band hs13 q33.1 q33.1 101700000 104800000 gpos100 band hs13 q33.2 q33.2 104800000 107000000 gneg band hs13 q33.3 q33.3 107000000 110300000 gpos100 band hs13 q34 q34 110300000 115169878 gneg band hs14 p13 p13 0 3700000 gvar band hs14 p12 p12 3700000 8100000 stalk band hs14 p11.2 p11.2 8100000 16100000 gvar band hs14 p11.1 p11.1 16100000 17600000 acen band hs14 q11.1 q11.1 17600000 19100000 acen band hs14 q11.2 q11.2 19100000 24600000 gneg band hs14 q12 q12 24600000 33300000 gpos100 band hs14 q13.1 q13.1 33300000 35300000 gneg band hs14 q13.2 q13.2 35300000 36600000 gpos50 band hs14 q13.3 q13.3 36600000 37800000 gneg band hs14 q21.1 q21.1 37800000 43500000 gpos100 band hs14 q21.2 q21.2 43500000 47200000 gneg band hs14 q21.3 q21.3 47200000 50900000 gpos100 band hs14 q22.1 q22.1 50900000 54100000 gneg band hs14 q22.2 q22.2 54100000 55500000 gpos25 band hs14 q22.3 q22.3 55500000 58100000 gneg band hs14 q23.1 q23.1 58100000 62100000 gpos75 band hs14 q23.2 q23.2 62100000 64800000 gneg band hs14 q23.3 q23.3 64800000 67900000 gpos50 band hs14 q24.1 q24.1 67900000 70200000 gneg band hs14 q24.2 q24.2 70200000 73800000 gpos50 band hs14 q24.3 q24.3 73800000 79300000 gneg band hs14 q31.1 q31.1 79300000 83600000 gpos100 band hs14 q31.2 q31.2 83600000 84900000 gneg band hs14 q31.3 q31.3 84900000 89800000 gpos100 band hs14 q32.11 q32.11 89800000 91900000 gneg band hs14 q32.12 q32.12 91900000 94700000 gpos25 band hs14 q32.13 q32.13 94700000 96300000 gneg band hs14 q32.2 q32.2 96300000 101400000 gpos50 band hs14 q32.31 q32.31 101400000 103200000 gneg band hs14 q32.32 q32.32 103200000 104000000 gpos50 band hs14 q32.33 q32.33 104000000 107349540 gneg band hs15 p13 p13 0 3900000 gvar band hs15 p12 p12 3900000 8700000 stalk band hs15 p11.2 p11.2 8700000 15800000 gvar band hs15 p11.1 p11.1 15800000 19000000 acen band hs15 q11.1 q11.1 19000000 20700000 acen band hs15 q11.2 q11.2 20700000 25700000 gneg band hs15 q12 q12 25700000 28100000 gpos50 band hs15 q13.1 q13.1 28100000 30300000 gneg band hs15 q13.2 q13.2 30300000 31200000 gpos50 band hs15 q13.3 q13.3 31200000 33600000 gneg band hs15 q14 q14 33600000 40100000 gpos75 band hs15 q15.1 q15.1 40100000 42800000 gneg band hs15 q15.2 q15.2 42800000 43600000 gpos25 band hs15 q15.3 q15.3 43600000 44800000 gneg band hs15 q21.1 q21.1 44800000 49500000 gpos75 band hs15 q21.2 q21.2 49500000 52900000 gneg band hs15 q21.3 q21.3 52900000 59100000 gpos75 band hs15 q22.1 q22.1 59100000 59300000 gneg band hs15 q22.2 q22.2 59300000 63700000 gpos25 band hs15 q22.31 q22.31 63700000 67200000 gneg band hs15 q22.32 q22.32 67200000 67300000 gpos25 band hs15 q22.33 q22.33 67300000 67500000 gneg band hs15 q23 q23 67500000 72700000 gpos25 band hs15 q24.1 q24.1 72700000 75200000 gneg band hs15 q24.2 q24.2 75200000 76600000 gpos25 band hs15 q24.3 q24.3 76600000 78300000 gneg band hs15 q25.1 q25.1 78300000 81700000 gpos50 band hs15 q25.2 q25.2 81700000 85200000 gneg band hs15 q25.3 q25.3 85200000 89100000 gpos50 band hs15 q26.1 q26.1 89100000 94300000 gneg band hs15 q26.2 q26.2 94300000 98500000 gpos50 band hs15 q26.3 q26.3 98500000 102531392 gneg band hs16 p13.3 p13.3 0 7900000 gneg band hs16 p13.2 p13.2 7900000 10500000 gpos50 band hs16 p13.13 p13.13 10500000 12600000 gneg band hs16 p13.12 p13.12 12600000 14800000 gpos50 band hs16 p13.11 p13.11 14800000 16800000 gneg band hs16 p12.3 p12.3 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10700000 gneg band hs17 p12 p12 10700000 16000000 gpos75 band hs17 p11.2 p11.2 16000000 22200000 gneg band hs17 p11.1 p11.1 22200000 24000000 acen band hs17 q11.1 q11.1 24000000 25800000 acen band hs17 q11.2 q11.2 25800000 31800000 gneg band hs17 q12 q12 31800000 38100000 gpos50 band hs17 q21.1 q21.1 38100000 38400000 gneg band hs17 q21.2 q21.2 38400000 40900000 gpos25 band hs17 q21.31 q21.31 40900000 44900000 gneg band hs17 q21.32 q21.32 44900000 47400000 gpos25 band hs17 q21.33 q21.33 47400000 50200000 gneg band hs17 q22 q22 50200000 57600000 gpos75 band hs17 q23.1 q23.1 57600000 58300000 gneg band hs17 q23.2 q23.2 58300000 61100000 gpos75 band hs17 q23.3 q23.3 61100000 62600000 gneg band hs17 q24.1 q24.1 62600000 64200000 gpos50 band hs17 q24.2 q24.2 64200000 67100000 gneg band hs17 q24.3 q24.3 67100000 70900000 gpos75 band hs17 q25.1 q25.1 70900000 74800000 gneg band hs17 q25.2 q25.2 74800000 75300000 gpos25 band hs17 q25.3 q25.3 75300000 81195210 gneg band hs18 p11.32 p11.32 0 2900000 gneg band hs18 p11.31 p11.31 2900000 7100000 gpos50 band hs18 p11.23 p11.23 7100000 8500000 gneg band hs18 p11.22 p11.22 8500000 10900000 gpos25 band hs18 p11.21 p11.21 10900000 15400000 gneg band hs18 p11.1 p11.1 15400000 17200000 acen band hs18 q11.1 q11.1 17200000 19000000 acen band hs18 q11.2 q11.2 19000000 25000000 gneg band hs18 q12.1 q12.1 25000000 32700000 gpos100 band hs18 q12.2 q12.2 32700000 37200000 gneg band hs18 q12.3 q12.3 37200000 43500000 gpos75 band hs18 q21.1 q21.1 43500000 48200000 gneg band hs18 q21.2 q21.2 48200000 53800000 gpos75 band hs18 q21.31 q21.31 53800000 56200000 gneg band hs18 q21.32 q21.32 56200000 59000000 gpos50 band hs18 q21.33 q21.33 59000000 61600000 gneg band hs18 q22.1 q22.1 61600000 66800000 gpos100 band hs18 q22.2 q22.2 66800000 68700000 gneg band hs18 q22.3 q22.3 68700000 73100000 gpos25 band hs18 q23 q23 73100000 78077248 gneg band hs19 p13.3 p13.3 0 6900000 gneg band hs19 p13.2 p13.2 6900000 13900000 gpos25 band hs19 p13.13 p13.13 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q21.32 q21.32 91800000 93500000 gneg band hsX q21.33 q21.33 93500000 98300000 gpos75 band hsX q22.1 q22.1 98300000 102600000 gneg band hsX q22.2 q22.2 102600000 103700000 gpos50 band hsX q22.3 q22.3 103700000 108700000 gneg band hsX q23 q23 108700000 116500000 gpos75 band hsX q24 q24 116500000 120900000 gneg band hsX q25 q25 120900000 128700000 gpos100 band hsX q26.1 q26.1 128700000 130400000 gneg band hsX q26.2 q26.2 130400000 133600000 gpos25 band hsX q26.3 q26.3 133600000 138000000 gneg band hsX q27.1 q27.1 138000000 140300000 gpos75 band hsX q27.2 q27.2 140300000 142100000 gneg band hsX q27.3 q27.3 142100000 147100000 gpos100 band hsX q28 q28 147100000 155270560 gneg band hsY p11.32 p11.32 0 2500000 gneg band hsY p11.31 p11.31 2500000 3000000 gpos50 band hsY p11.2 p11.2 3000000 11600000 gneg band hsY p11.1 p11.1 11600000 12500000 acen band hsY q11.1 q11.1 12500000 13400000 acen band hsY q11.21 q11.21 13400000 15100000 gneg band hsY q11.221 q11.221 15100000 19800000 gpos50 band hsY 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