Mercurial > repos > iuc > cnvkit_fix

comparison test-data/sample.cnv.vcf @ 5:aa3fa1c29ccf draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit fc1282ec68b346988203ead860e9b9d6a47e9efb
author iuc
date Sat, 01 Mar 2025 12:00:32 +0000
parents b02eb4c918f2
children
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4:b02eb4c918f2 5:aa3fa1c29ccf
1 ##fileformat=VCFv4.2 1 ##fileformat=VCFv4.2
2 ##fileDate=20250120 2 ##fileDate=20250203
3 ##source=CNVkit v0.9.11 3 ##source=CNVkit v0.9.12
4 ##INFO=<ID=CIEND,Number=2,Type=Integer,Description="Confidence interval around END for imprecise variants"> 4 ##INFO=<ID=CIEND,Number=2,Type=Integer,Description="Confidence interval around END for imprecise variants">
5 ##INFO=<ID=CIPOS,Number=2,Type=Integer,Description="Confidence interval around POS for imprecise variants"> 5 ##INFO=<ID=CIPOS,Number=2,Type=Integer,Description="Confidence interval around POS for imprecise variants">
6 ##INFO=<ID=END,Number=1,Type=Integer,Description="End position of the variant described in this record"> 6 ##INFO=<ID=END,Number=1,Type=Integer,Description="End position of the variant described in this record">
7 ##INFO=<ID=IMPRECISE,Number=0,Type=Flag,Description="Imprecise structural variation"> 7 ##INFO=<ID=IMPRECISE,Number=0,Type=Flag,Description="Imprecise structural variation">
8 ##INFO=<ID=SVLEN,Number=1,Type=Integer,Description="Difference in length between REF and ALT alleles"> 8 ##INFO=<ID=SVLEN,Number=1,Type=Integer,Description="Difference in length between REF and ALT alleles">