Mercurial > repos > iuc > cnvkit_fix

comparison test-data/tumor.bintest.cns @ 0:f64acbe71392 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit c35b83e4b65b211377c9f616c77d7306da48a984
author iuc
date Sun, 14 May 2023 20:11:33 +0000
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comparison
equal deleted inserted replaced
-1:000000000000 0:f64acbe71392
1 chromosome start end gene depth log2 weight probes p_bintest
2 chrM 1394 1667 - 3.78022 1.83095 0.659673 1 0.00305626
3 chrM 1667 1940 - 1.80586 1.51502 0.947315 1 2.21288e-10
4 chrM 2212 2485 - 1.65201 1.13169 0.859195 1 0.0043234
5 chrM 3579 3853 - 2.30292 1.39081 0.949177 1 3.36615e-09
6 chrM 3853 4126 - 2.74359 1.7165 0.950488 1 8.22011e-14
7 chrM 5284 5579 - 5.97966 3.04522 0.33087 1 0.000409792
8 chrM 5586 5655 - 0 -19.5746 0.90138 1 0
9 chrM 5656 5729 - 0 -18.4148 0.481257 1 6.28915e-143
10 chrM 5760 5891 - 1.79389 1.41828 0.927253 1 4.90435e-07
11 chrM 5903 6171 - 2.15299 1.33821 0.949892 1 9.37152e-09
12 chrM 6708 6977 - 2.03717 1.04921 0.91555 1 0.000589447
13 chrM 6977 7245 - 3.05597 1.2395 0.927373 1 1.2045e-05
14 chrM 7517 7767 - 1.944 1.55628 0.749834 1 0.00324207
15 chrM 8365 8630 - 1.0717 1.55444 0.732013 1 0.00437839
16 chrM 8630 8896 - 2.07895 1.36838 0.913995 1 9.21442e-06
17 chrM 8896 9162 - 3.66165 1.94013 0.947786 1 1.58627e-16
18 chrM 9162 9427 - 3.60755 2.19544 0.759338 1 2.06073e-05
19 chrM 9693 9959 - 2.07143 1.61872 0.803258 1 0.000525673
20 chrM 9959 10224 - 0.00377358 -7.0323 0.80602 1 2.93745e-56
21 chrM 10224 10490 - 1.44361 1.44622 0.930173 1 1.59322e-07
22 chrM 10490 10756 - 1.82331 1.58765 0.834811 1 0.000230056
23 chrM 10756 11022 - 1.12406 2.10303 0.817954 1 2.62602e-06
24 chrM 11022 11287 - 4.27925 2.56694 0.949534 1 3.32731e-29
25 chrM 11287 11553 - 2.93609 1.75192 0.940891 1 3.45973e-12
26 chrM 12616 12882 - 2.48872 1.20906 0.894503 1 0.000409792
27 chrM 12882 13147 - 4.50943 1.65031 0.911105 1 1.1997e-07
28 chrM 13147 13413 - 1.47368 0.874788 0.94844 1 0.000274482
29 chrM 13413 13679 - 2.95865 1.34513 0.949837 1 8.56465e-09
30 chrM 14210 14476 - 2.21053 1.53132 0.832178 1 0.000409792
31 chrM 14746 14987 - 8.14523 2.66335 0.577696 1 0.00010697
32 chrM 15470 15711 - 3.9751 2.55959 0.947021 1 8.98929e-28
33 chrM 15711 15953 - 0.809917 0.743495 0.944938 1 0.00285344
34 chrM 15955 16023 - 0 -19.8307 0.900795 1 0