Mercurial > repos > iuc > cnvkit_scatter

diff scatter.xml @ 3:02446206f574 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 9d922676808c5f57e9c01b148eec6cc0a63c53e5
author iuc
date Fri, 13 Dec 2024 23:59:03 +0000
parents 3323a7867128
children
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--- a/scatter.xml	Mon Apr 22 17:45:08 2024 +0000
+++ b/scatter.xml	Fri Dec 13 23:59:03 2024 +0000
@@ -89,8 +89,14 @@
     <tests>
         <test expect_num_outputs="1">
             <param name="input_cnr_file" ftype="tabular" value="tumor.cnr" />
-            <param name="zygosity_freq" value="0.25" />
-            <param name="by_bin" value="1" />
+            <section name="advanced_settings">
+                <section name="additional_SNP_allelic_process">
+                    <param name="zygosity_freq" value="0.25" />
+                </section>
+                <section name="plot_aesthetics">
+                    <param name="by_bin" value="1" />
+                </section>
+            </section>
             <output name="out_scatter_file" file="sample-scatter.pdf" ftype="pdf" compare="sim_size">
                 <assert_contents><has_size value="12000" delta="5000" /></assert_contents>
             </output>