Mercurial > repos > iuc > cnvkit_segment

diff test-data/sample.cnv.cdt @ 4:c576f0480c66 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
author iuc
date Mon, 20 Jan 2025 16:37:32 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/sample.cnv.cdt	Mon Jan 20 16:37:32 2025 +0000
@@ -0,0 +1,57 @@
+GID	CLID	NAME	GWEIGHT	sample
+AID				ARRY000X
+EWEIGHT				1
+GENE0X	IMAGE:0	chrM:848-1121:-	1	-0.545691
+GENE1X	IMAGE:1	chrM:1394-1667:-	1	0.488494
+GENE2X	IMAGE:2	chrM:1667-1940:-	1	0.0200539
+GENE3X	IMAGE:3	chrM:2212-2485:-	1	-0.234816
+GENE4X	IMAGE:4	chrM:2485-2758:-	1	0.153636
+GENE5X	IMAGE:5	chrM:2758-3031:-	1	-1.35597
+GENE6X	IMAGE:6	chrM:3031-3304:-	1	0.385198
+GENE7X	IMAGE:7	chrM:3306-3579:-	1	-1.37983
+GENE8X	IMAGE:8	chrM:3579-3853:-	1	0.471839
+GENE9X	IMAGE:9	chrM:3853-4126:-	1	0.444955
+GENE10X	IMAGE:10	chrM:4126-4400:-	1	0.465611
+GENE11X	IMAGE:11	chrM:4401-4695:-	1	-0.583114
+GENE12X	IMAGE:12	chrM:4695-4990:-	1	1.13235
+GENE13X	IMAGE:13	chrM:4990-5284:-	1	0.209867
+GENE14X	IMAGE:14	chrM:5284-5579:-	1	1.18493
+GENE15X	IMAGE:15	chrM:5586-5655:-	1	-21.0389
+GENE16X	IMAGE:16	chrM:5656-5729:-	1	-19.8096
+GENE17X	IMAGE:17	chrM:5760-5891:-	1	0.0
+GENE18X	IMAGE:18	chrM:5903-6171:-	1	-0.0283011
+GENE19X	IMAGE:19	chrM:6171-6440:-	1	-0.212606
+GENE20X	IMAGE:20	chrM:6440-6708:-	1	-0.38297
+GENE21X	IMAGE:21	chrM:6708-6977:-	1	-0.317296
+GENE22X	IMAGE:22	chrM:6977-7245:-	1	-0.127011
+GENE23X	IMAGE:23	chrM:7245-7514:-	1	0.72831
+GENE24X	IMAGE:24	chrM:7517-7767:-	1	0.680162
+GENE25X	IMAGE:25	chrM:7767-8018:-	1	-0.510836
+GENE26X	IMAGE:26	chrM:8018-8269:-	1	-0.663743
+GENE27X	IMAGE:27	chrM:8365-8630:-	1	0.28099
+GENE28X	IMAGE:28	chrM:8630-8896:-	1	-0.154606
+GENE29X	IMAGE:29	chrM:8896-9162:-	1	0.147562
+GENE30X	IMAGE:30	chrM:9162-9427:-	1	0.937798
+GENE31X	IMAGE:31	chrM:9693-9959:-	1	0.459741
+GENE32X	IMAGE:32	chrM:9959-10224:-	1	-8.75948
+GENE33X	IMAGE:33	chrM:10224-10490:-	1	0.509209
+GENE34X	IMAGE:34	chrM:10490-10756:-	1	0.0655732
+GENE35X	IMAGE:35	chrM:10756-11022:-	1	0.238204
+GENE36X	IMAGE:36	chrM:11022-11287:-	1	1.20043
+GENE37X	IMAGE:37	chrM:11287-11553:-	1	0.224804
+GENE38X	IMAGE:38	chrM:11553-11819:-	1	-1.50066
+GENE39X	IMAGE:39	chrM:11819-12084:-	1	0.0920864
+GENE40X	IMAGE:40	chrM:12084-12350:-	1	-1.15941
+GENE41X	IMAGE:41	chrM:12350-12616:-	1	-1.25242
+GENE42X	IMAGE:42	chrM:12616-12882:-	1	-0.187246
+GENE43X	IMAGE:43	chrM:12882-13147:-	1	0.419127
+GENE44X	IMAGE:44	chrM:13147-13413:-	1	-0.730007
+GENE45X	IMAGE:45	chrM:13413-13679:-	1	-0.0213761
+GENE46X	IMAGE:46	chrM:13944-14210:-	1	-0.337011
+GENE47X	IMAGE:47	chrM:14210-14476:-	1	-0.0427224
+GENE48X	IMAGE:48	chrM:14746-14987:-	1	0.722701
+GENE49X	IMAGE:49	chrM:14987-15228:-	1	-0.105067
+GENE50X	IMAGE:50	chrM:15228-15470:-	1	-0.96567
+GENE51X	IMAGE:51	chrM:15470-15711:-	1	0.576278
+GENE52X	IMAGE:52	chrM:15711-15953:-	1	-1.38778
+GENE53X	IMAGE:53	chrM:15955-16023:-	1	-21.1972