# HG changeset patch # User iuc # Date 1707514779 0 # Node ID dba114391c988d1053fc4fe0ae1e26a3394e646c # Parent f9cb3a4339c29112b9d8efa2f3cf506b8e9e439d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/codeml commit 866bfa31d035d511ca31f82c8ebac0f1df36b6ac diff -r f9cb3a4339c2 -r dba114391c98 codeml.xml --- a/codeml.xml Sat Nov 27 09:55:34 2021 +0000 +++ b/codeml.xml Fri Feb 09 21:39:39 2024 +0000 @@ -2,22 +2,20 @@ <description> Detects positive selection (paml package) </description> - <macros> <import>macros.xml</import> </macros> - + <xrefs> + <xref type="bio.tools">paml</xref> + </xrefs> <requirements> <requirement type="package" version="@TOOL_VERSION@">paml</requirement> </requirements> - <version_command><![CDATA[ codeml /dev/null 2>&1 | tail -1 ]]></version_command> - <command><![CDATA[ cp '$codeml_ctl' '$ctl' && codeml '$codeml_ctl' ]]></command> - <configfiles> <configfile name="codeml_ctl"><![CDATA[ seqfile = $concat_nuc * sequence data file name