Mercurial > repos > iuc > colibread_commet

comparison test-data/discosnpRAD/fasta.fa @ 4:8c53dc8b4adb draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/colibread commit 0ed02865f048ad7471ea79509c0e23162bc29166"
author iuc
date Mon, 17 Aug 2020 10:38:36 -0400
parents 291753bf4013
children
comparison
equal deleted inserted replaced
3:c53c11869b29 4:8c53dc8b4adb
1 >SNP_higher_path_7|P_1:30_C/T,P_2:49_C/G|high|nb_pol_2|left_unitig_length_1|right_unitig_length_16|C1_49|Q1_0|G1_0/1:702,15,702|rank_0 1 >SNP_higher_path_7|P_1:30_C/T,P_2:49_C/G|high|nb_pol_2|left_unitig_length_1|right_unitig_length_16|left_contig_length_40|right_contig_length_16|C1_49|Q1_0|G1_0/1:702,15,702|rank_0
2 gATTGGATGCGAGCTTCTTTACCCGATCATACGTCCAGCGAAGGGATTAGCTGTCGTTAGGGCCCTAATTCCTGCCTGGAGcggacaacaaagtagt 2 gggagcgtccgataattagtgtcctacttagtcaatagggATTGGATGCGAGCTTCTTTACCCGATCATACGTCCAGCGAAGGGATTAGCTGTCGTTAGGGCCCTAATTCCTGCCTGGAGcggacaacaaagtagt
3 >SNP_lower_path_7|P_1:30_C/T,P_2:49_C/G|high|nb_pol_2|left_unitig_length_1|right_unitig_length_16|C1_49|Q1_0|G1_0/1:702,15,702|rank_0 3 >SNP_lower_path_7|P_1:30_C/T,P_2:49_C/G|high|nb_pol_2|left_unitig_length_1|right_unitig_length_16|left_contig_length_40|right_contig_length_16|C1_49|Q1_0|G1_0/1:702,15,702|rank_0
4 gATTGGATGCGAGCTTCTTTACCCGATCATATGTCCAGCGAAGGGATTAGGTGTCGTTAGGGCCCTAATTCCTGCCTGGAGcggacaacaaagtagt 4 gggagcgtccgataattagtgtcctacttagtcaatagggATTGGATGCGAGCTTCTTTACCCGATCATATGTCCAGCGAAGGGATTAGGTGTCGTTAGGGCCCTAATTCCTGCCTGGAGcggacaacaaagtagt
5 >SNP_higher_path_6|P_1:30_C/G|high|nb_pol_1|left_unitig_length_1|right_unitig_length_8|C1_49|Q1_0|G1_0/1:702,15,702|rank_0 5 >SNP_higher_path_6|P_1:30_C/G|high|nb_pol_1|left_unitig_length_1|right_unitig_length_8|left_contig_length_67|right_contig_length_8|C1_49|Q1_0|G1_0/1:702,15,702|rank_0
6 tATGATCGGGTAAAGAAGCTCGCATCCAATCCCTATTGACTAAGTAGGACACTAATTATCGGacgctccc 6 actactttgttgtccgctccaggcaggaattagggccctaacgacagctaatcccttcgctggacgtATGATCGGGTAAAGAAGCTCGCATCCAATCCCTATTGACTAAGTAGGACACTAATTATCGGacgctccc
7 >SNP_lower_path_6|P_1:30_C/G|high|nb_pol_1|left_unitig_length_1|right_unitig_length_8|C1_49|Q1_0|G1_0/1:702,15,702|rank_0 7 >SNP_lower_path_6|P_1:30_C/G|high|nb_pol_1|left_unitig_length_1|right_unitig_length_8|left_contig_length_67|right_contig_length_8|C1_49|Q1_0|G1_0/1:702,15,702|rank_0
8 tATGATCGGGTAAAGAAGCTCGCATCCAATCGCTATTGACTAAGTAGGACACTAATTATCGGacgctccc 8 actactttgttgtccgctccaggcaggaattagggccctaacgacagctaatcccttcgctggacgtATGATCGGGTAAAGAAGCTCGCATCCAATCGCTATTGACTAAGTAGGACACTAATTATCGGacgctccc
9 >SNP_higher_path_5|P_1:30_A/C|high|nb_pol_1|left_unitig_length_5|right_unitig_length_51|C1_44|Q1_0|G1_0/1:632,15,632|rank_0 9 >SNP_higher_path_5|P_1:30_A/C|high|nb_pol_1|left_unitig_length_5|right_unitig_length_51|left_contig_length_5|right_contig_length_51|C1_44|Q1_0|G1_0/1:632,15,632|rank_0
10 ctatcGCGGCTGTTCGTATGATGACCTATGCGGAGAGGGGAAACCAGATGGGTGACCCAAAAACGCacgcgacctctgtaatagggctccaggtgggaattaggcgtggtccgtcag 10 ctatcGCGGCTGTTCGTATGATGACCTATGCGGAGAGGGGAAACCAGATGGGTGACCCAAAAACGCacgcgacctctgtaatagggctccaggtgggaattaggcgtggtccgtcag
11 >SNP_lower_path_5|P_1:30_A/C|high|nb_pol_1|left_unitig_length_5|right_unitig_length_51|C1_44|Q1_0|G1_0/1:632,15,632|rank_0 11 >SNP_lower_path_5|P_1:30_A/C|high|nb_pol_1|left_unitig_length_5|right_unitig_length_51|left_contig_length_5|right_contig_length_51|C1_44|Q1_0|G1_0/1:632,15,632|rank_0
12 ctatcGCGGCTGTTCGTATGATGACCTATGCGGAGCGGGGAAACCAGATGGGTGACCCAAAAACGCacgcgacctctgtaatagggctccaggtgggaattaggcgtggtccgtcag 12 ctatcGCGGCTGTTCGTATGATGACCTATGCGGAGCGGGGAAACCAGATGGGTGACCCAAAAACGCacgcgacctctgtaatagggctccaggtgggaattaggcgtggtccgtcag
13 >SNP_higher_path_4|P_1:30_A/G|high|nb_pol_1|left_unitig_length_51|right_unitig_length_0|C1_44|Q1_0|G1_0/1:632,15,632|rank_0 13 >SNP_higher_path_4|P_1:30_A/G|high|nb_pol_1|left_unitig_length_51|right_unitig_length_0|left_contig_length_87|right_contig_length_0|C1_44|Q1_0|G1_0/1:632,15,632|rank_0
14 ggggaaaccagatgggtgacccaaaaacgcacgcgacctctgtaatagggcTCCAGGTGGGAATTAGGCGTGGTCCGTCAGAAATATAGGAGACGAAAACATAGCTCTTCTT 14 ctatcgcggctgttcgtatgatgacctatgcggagcggggaaaccagatgggtgacccaaaaacgcacgcgacctctgtaatagggcTCCAGGTGGGAATTAGGCGTGGTCCGTCAGAAATATAGGAGACGAAAACATAGCTCTTCTT
15 >SNP_lower_path_4|P_1:30_A/G|high|nb_pol_1|left_unitig_length_51|right_unitig_length_0|C1_44|Q1_0|G1_0/1:632,15,632|rank_0 15 >SNP_lower_path_4|P_1:30_A/G|high|nb_pol_1|left_unitig_length_51|right_unitig_length_0|left_contig_length_87|right_contig_length_0|C1_44|Q1_0|G1_0/1:632,15,632|rank_0
16 ggggaaaccagatgggtgacccaaaaacgcacgcgacctctgtaatagggcTCCAGGTGGGAATTAGGCGTGGTCCGTCAGGAATATAGGAGACGAAAACATAGCTCTTCTT 16 ctatcgcggctgttcgtatgatgacctatgcggagcggggaaaccagatgggtgacccaaaaacgcacgcgacctctgtaatagggcTCCAGGTGGGAATTAGGCGTGGTCCGTCAGGAATATAGGAGACGAAAACATAGCTCTTCTT
17 >SNP_higher_path_3|P_1:30_A/C|high|nb_pol_1|left_unitig_length_23|right_unitig_length_0|C1_42|Q1_0|G1_0/1:604,15,604|rank_0 17 >SNP_higher_path_3|P_1:30_A/C|high|nb_pol_1|left_unitig_length_23|right_unitig_length_0|left_contig_length_93|right_contig_length_0|C1_42|Q1_0|G1_0/1:604,15,604|rank_0
18 ccctttatattggctagacggtcTAGTTTTCAATAACCCCTGAGGAGCGGCACAGTATGATACAGGGAGTGAAGGAGGGA 18 gtcgttgagtcagctcataagccaacgaccagctcactcgccctggacaggagaggcgatcttacaagttccctttatattggctagacggtcTAGTTTTCAATAACCCCTGAGGAGCGGCACAGTATGATACAGGGAGTGAAGGAGGGA
19 >SNP_lower_path_3|P_1:30_A/C|high|nb_pol_1|left_unitig_length_23|right_unitig_length_0|C1_42|Q1_0|G1_0/1:604,15,604|rank_0 19 >SNP_lower_path_3|P_1:30_A/C|high|nb_pol_1|left_unitig_length_23|right_unitig_length_0|left_contig_length_93|right_contig_length_0|C1_42|Q1_0|G1_0/1:604,15,604|rank_0
20 ccctttatattggctagacggtcTAGTTTTCAATAACCCCTGAGGAGCGGCACCGTATGATACAGGGAGTGAAGGAGGGA 20 gtcgttgagtcagctcataagccaacgaccagctcactcgccctggacaggagaggcgatcttacaagttccctttatattggctagacggtcTAGTTTTCAATAACCCCTGAGGAGCGGCACCGTATGATACAGGGAGTGAAGGAGGGA
21 >SNP_higher_path_2|P_1:30_C/T|high|nb_pol_1|left_unitig_length_8|right_unitig_length_0|C1_49|Q1_0|G1_0/1:702,15,702|rank_0 21 >SNP_higher_path_2|P_1:30_C/T|high|nb_pol_1|left_unitig_length_8|right_unitig_length_0|left_contig_length_106|right_contig_length_0|C1_49|Q1_0|G1_0/1:702,15,702|rank_0
22 ctattgacTAAGTAGGACACTAATTATCGGACGCTCCCCGGGGGAGGTCAAC 22 actactttgttgtccgctccaggcaggaattagggccctaacgacagctaatcccttcgctggacgtatgatcgggtaaagaagctcgcatccaatcgctattgacTAAGTAGGACACTAATTATCGGACGCTCCCCGGGGGAGGTCAAC
23 >SNP_lower_path_2|P_1:30_C/T|high|nb_pol_1|left_unitig_length_8|right_unitig_length_0|C1_49|Q1_0|G1_0/1:702,15,702|rank_0 23 >SNP_lower_path_2|P_1:30_C/T|high|nb_pol_1|left_unitig_length_8|right_unitig_length_0|left_contig_length_106|right_contig_length_0|C1_49|Q1_0|G1_0/1:702,15,702|rank_0
24 ctattgacTAAGTAGGACACTAATTATCGGACGCTCCCTGGGGGAGGTCAAC 24 actactttgttgtccgctccaggcaggaattagggccctaacgacagctaatcccttcgctggacgtatgatcgggtaaagaagctcgcatccaatcgctattgacTAAGTAGGACACTAATTATCGGACGCTCCCTGGGGGAGGTCAAC
25 >SNP_higher_path_1|P_1:30_A/T|high|nb_pol_1|left_unitig_length_23|right_unitig_length_39|C1_42|Q1_0|G1_0/1:604,15,604|rank_0 25 >SNP_higher_path_1|P_1:30_A/T|high|nb_pol_1|left_unitig_length_23|right_unitig_length_39|left_contig_length_23|right_contig_length_39|C1_42|Q1_0|G1_0/1:604,15,604|rank_0
26 gtgccgctcctcaggggttattgAAAACTAGACCGTCTAGCCAATATAAAGGGAACTTGTAAGATCGCCTCTCCTGTCCAGGGCgagtgagctggtcgttggcttatgagctgactcaacgac 26 gtgccgctcctcaggggttattgAAAACTAGACCGTCTAGCCAATATAAAGGGAACTTGTAAGATCGCCTCTCCTGTCCAGGGCgagtgagctggtcgttggcttatgagctgactcaacgac
27 >SNP_lower_path_1|P_1:30_A/T|high|nb_pol_1|left_unitig_length_23|right_unitig_length_39|C1_42|Q1_0|G1_0/1:604,15,604|rank_0 27 >SNP_lower_path_1|P_1:30_A/T|high|nb_pol_1|left_unitig_length_23|right_unitig_length_39|left_contig_length_23|right_contig_length_39|C1_42|Q1_0|G1_0/1:604,15,604|rank_0
28 gtgccgctcctcaggggttattgAAAACTAGACCGTCTAGCCAATATAAAGGGTACTTGTAAGATCGCCTCTCCTGTCCAGGGCgagtgagctggtcgttggcttatgagctgactcaacgac 28 gtgccgctcctcaggggttattgAAAACTAGACCGTCTAGCCAATATAAAGGGTACTTGTAAGATCGCCTCTCCTGTCCAGGGCgagtgagctggtcgttggcttatgagctgactcaacgac