# HG changeset patch
# User iuc
# Date 1602625091 0
# Node ID 6322de5e24e5c1f29920b99ef562196a7f5af1ea
# Parent  435a98f01ae915540213febff23750d2fa04d27d
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/colibread commit 7ea9a5c6d9e7212c38be96baa6615af1ea9d5a8e"

diff -r 435a98f01ae9 -r 6322de5e24e5 lordec.xml
--- a/lordec.xml	Mon Aug 17 10:38:08 2020 -0400
+++ b/lordec.xml	Tue Oct 13 21:38:11 2020 +0000
@@ -1,5 +1,5 @@
 <?xml version='1.0' encoding='utf-8'?>
-<tool profile="16.04" id="lordec" name="Lordec" version="0.9">
+<tool profile="16.04" id="lordec" name="Lordec" version="0.9+galaxy1">
     <description>is a set a programs for correcting sequencing errors in PacBio reads</description>
     <macros>
         <import>macros.xml</import>
@@ -16,8 +16,8 @@
                 -t ${program_type_choice.advanced_options.t}
                 -b ${program_type_choice.advanced_options.b}
                 -e ${program_type_choice.advanced_options.e}
-                -T ${program_type_choice.advanced_options.T}
             #end if
+            -T \${GALAXY_SLOTS:-1}
             -o '${corrected_read_file}'
 
 
@@ -60,7 +60,6 @@
                         <param argument="-t" type="integer" label="Number of target k-mers" value="5" />
                         <param argument="-b" type="integer" label="Maximum number of branches to explore" value="200" />
                         <param argument="-e" type="float" label="Maximum error rate" value="0.4" />
-                        <param argument="-T" type="integer" label="Number of threads" value="1" />
                     </when>
                 </conditional>
             </when>