Mercurial > repos > iuc > comebin
diff comebin.xml @ 1:15f6ef1d7c96 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/comebin/ commit a298275e9754bf6bc71e5ee794121bbc6b3d426c
| author | iuc |
|---|---|
| date | Wed, 30 Jul 2025 11:47:15 +0000 |
| parents | 2576c9132481 |
| children | ddfb9c10740a |
line wrap: on
line diff
--- a/comebin.xml Wed Jul 30 05:56:42 2025 +0000 +++ b/comebin.xml Wed Jul 30 11:47:15 2025 +0000 @@ -35,11 +35,11 @@ <inputs> <param name="assembly_file" type="data" format="fasta" label="Metagenomic assembly file"/> <param name="bam_files" type="data" format="bam" multiple="true" label="Input bam file(s)"/> - <param name="learning" type="integer" default_value="6" label="Views for contrastive multiple-view learning"/> - <param name="loss" type="float" default_value="0.15" label="Temperature in loss function" help="0.07 is recommended for assemblies with an N50 > 10000"/> - <param name="emb_comebin" type="integer" default_value="2048" label="Embedding size for COMEBin network"/> - <param name="emb_cov" type="integer" default_value="2048" label="Embedding size for coverage network"/> - <param name="batch" type="integer" default_value="1024" label="Batch size"/> + <param name="learning" type="integer" value="6" label="Views for contrastive multiple-view learning"/> + <param name="loss" type="float" value="0.15" label="Temperature in loss function" help="0.07 is recommended for assemblies with an N50 > 10000"/> + <param name="emb_comebin" type="integer" value="2048" label="Embedding size for COMEBin network"/> + <param name="emb_cov" type="integer" value="2048" label="Embedding size for coverage network"/> + <param name="batch" type="integer" value="1024" label="Batch size"/> </inputs> <outputs> <collection name="bins" type="list" format="fasta" label="${tool.name}: BINS">