Mercurial > repos > iuc > concoct
changeset 2:7a145c72d375 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 77dea70f156d56c83b6851b61dc997d2b344bdc9
| author | iuc |
|---|---|
| date | Fri, 01 Jul 2022 14:14:44 +0000 |
| parents | 031f84cb2fd3 |
| children | 3842ef1b2f34 |
| files | concoct.xml macros.xml test-data/process_log.txt |
| diffstat | 3 files changed, 12 insertions(+), 12 deletions(-) [+] |
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--- a/concoct.xml Sun Mar 13 08:45:05 2022 +0000 +++ b/concoct.xml Fri Jul 01 14:14:44 2022 +0000 @@ -77,7 +77,7 @@ <param name="coverage_file" value="input1.tabular" ftype="tabular"/> <param name="composition_file" value="input1.fa.gz" ftype="fasta.gz"/> <param name="output_process_log" value="yes"/> - <output name="process_log" file="process_log.txt" ftype="txt" compare="contains"/> + <output name="process_log" file="process_log.txt" ftype="txt" compare="re_match"/> <output name="output_pca_components" ftype="tabular"> <assert_contents> <has_size value="367636"/>
--- a/macros.xml Sun Mar 13 08:45:05 2022 +0000 +++ b/macros.xml Fri Jul 01 14:14:44 2022 +0000 @@ -1,6 +1,6 @@ <macros> <token name="@TOOL_VERSION@">1.0.0</token> - <token name="@VERSION_SUFFIX@">0</token> + <token name="@VERSION_SUFFIX@">1</token> <token name="@PROFILE@">21.01</token> <xml name="requirements"> <requirements>
--- a/test-data/process_log.txt Sun Mar 13 08:45:05 2022 +0000 +++ b/test-data/process_log.txt Fri Jul 01 14:14:44 2022 +0000 @@ -1,10 +1,10 @@ -Results created at -Successfully loaded composition data. -Successfully loaded coverage data. -Performed PCA, resulted in 154 dimensions -Wrote PCA transformed file. -Wrote PCA components file. -PCA transformed data. -Will call vbgmm with parameters: outdir/, 400, 1000, 1 -Wrote assign file. -CONCOCT Finished +.*:Results created at +.*:Successfully loaded composition data\. +.*:Successfully loaded coverage data\. +.*:Performed PCA, resulted in 154 dimensions +.*:Wrote PCA transformed file\. +.*:Wrote PCA components file\. +.*:PCA transformed data\. +.*:Will call vbgmm with parameters: outdir/, 400, 1000, \d+ +.*:Wrote assign file\. +.*:CONCOCT Finished