Mercurial > repos > iuc > concoct_coverage_table

annotate test-data/ten_reads.fa @ 5:fd31cd168efc draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 86e1afebec29c10ef1e31196b23c24fde2d086da
author iuc
date Sun, 12 Nov 2023 14:31:03 +0000
parents 6302656ed45d
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
2
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
1 >contig-21000001_read_0 contig-21000001 9998 nucleotides
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
2 TTTCTCTCCCAGTCGTCGATCCGGTCTGTTTCAAAATAGAGCTGAAAGTTATTTGCTGCT
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
3 GTCTTTCTGTTCAGTGATTTACCGATCATTGCTTCGTAGT
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
4 >contig-21000001_read_1 contig-21000001 9998 nucleotides
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
5 GAGTCAGTCAGACGGCTGGCCCCGGAAATACCAGCAGCAATGGAGAAAATCCATCCTCCC
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
6 CGCCTGGAAGCGAAAGCAGAAATGACCAAATACCAGCGGC
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
7 >contig-21000001_read_2 contig-21000001 9998 nucleotides
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
8 TTTCAGAGAGGCTGTTTGAGTACTCCCATCCCCTGGGGGACAGAGGGCAGATTCTGGCCG
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
9 CTTCCCGGTGGCTGCAGCGGTTTGGCCTGGAGGCCAATGA
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
10 >contig-21000001_read_3 contig-21000001 9998 nucleotides
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
11 ACGATCACAAAAGGTCATTACGGCTGGCTGATTGATAAGGAGGCGGAAACGGAGGCTCTG
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
12 TTGGAAATAATCAGATCCGGTGAAAGTCAGGAGCGGGAGC
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
13 >contig-21000001_read_4 contig-21000001 9998 nucleotides
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
14 TAAAATGGTGCTGTTTCATGGATTCAACCATCTGTTCGATCTCATCCTCCATGGACAGGG
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
15 CCTGGTCGGAGGCAATGATGTGCAGATACTCCTCTTCACA
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
16 >contig-21000001_read_5 contig-21000001 9998 nucleotides
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
17 CAGTGCAGTCAGCCAGTTAAAGGATTTGATTACGGAAAATAAAGTGGTTCTTGTTAACGA
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
18 AAGTGGTTTGGACAGCAAGGTACGAGCAATCTATGATGCA
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
19 >contig-21000001_read_6 contig-21000001 9998 nucleotides
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
20 AGTGAGAAAAAAGCAAATAGATTTGCAGCAGAATTTCTTGTGGATGAATTATTGCTGAAA
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
21 CAGGAAATCGAGTTATATAAAATTAAGAAGCTTACAATAA
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
22 >contig-21000001_read_7 contig-21000001 9998 nucleotides
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
23 TGGTAGAAAAATAATTATTGATGCAGATTTATGTATCAAGTTGGGAGGAAGTAATAAGTA
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
24 TAGATATTTGCATGATGTGCTTCCTTTGATTGCAAAAGAG
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
25 >contig-21000001_read_8 contig-21000001 9998 nucleotides
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
26 TTTTCCAATGTGAAGATTGAGCCGCTGTTTGAAGAGATGGTGGATTTTGAGACTTTCTCA
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
27 AAGTCTGATTACCGTGCAGTGAAGATCAAAGACTGCGTGG
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
28 >contig-21000001_read_9 contig-21000001 9998 nucleotides
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
29 TCCACTCCTTCGATGGCCTCCAGCTTTCTCTCCCAGTCGTCGATCCGGTCTGTTTCAAAA
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
30 TAGAGCTGAAAGTTATTTGCTGCTGTCTTTCTGTTCAGTG
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
31 >contig-75000034_read_0 contig-75000034 1615 nucleotides
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
32 TTTTACCTTCATCACAAGAAAAGATAACTACGATGTCACAAAACAGACGGAGGTTATCCT
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
33 AAGGGCGGTCAAAAAGCTGGGTGTAAATGCAGAACGGACC
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
34 >contig-75000034_read_1 contig-75000034 1615 nucleotides
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
35 CAGGATTTACAGGATCTGGTCTGCGATATGATGTAGTGCTGTGCCGTCGATTCACAGACG
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
36 CGCCTGAGAGAACAGGAGGATTGGATGGAAAAACATTATG
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
37 >contig-75000034_read_2 contig-75000034 1615 nucleotides
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
38 GGAAATACGGCAGGAAGATCCCGTTCAGCGATGAAGCCGCCGCCCGTTTTACCTGGGGGG
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
39 AGGCCCAGGTGCTGGTCCATGTGGAAGAGGGGCGTGTCCG
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
40 >contig-75000034_read_3 contig-75000034 1615 nucleotides
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
41 ATTGTCCACGAGGCCCTGATGGTGGAGCCGACGGAGACGGAATCAAAGGAGAACTTAGAT
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
42 GAACTGATCGCCGTGTTCCACGAGATCTATGAGACGGCGA
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
43 >contig-75000034_read_4 contig-75000034 1615 nucleotides
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
44 ATCCCAATTTCGGCATGGAGGAGTATTTGCTTTACGATGTGGAAGAAGAGGAATGCATTC
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
45 TCTACCTGTGGCAGAATGAGAAAACCGTGGTCATAGGCAG
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
46 >contig-75000034_read_5 contig-75000034 1615 nucleotides
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
47 TACCCCTATCCCAATTTCGGCATGGAGGAGTATTTGCTTTACGATGTGGAAGAAGAGGAA
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
48 TGCATTCTCTACCTGTGGCAGAATGAGAAAACCGTGGTCA
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
49 >contig-75000034_read_6 contig-75000034 1615 nucleotides
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
50 ATCAAAGGAGAACTTAGATGAACTGATCGCCGTGTTCCACGAGATCTATGAGACGGCGAA
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
51 GCGTGATCCCGAATATATCCGGAGCTCCCCCCACATCACC
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
52 >contig-75000034_read_7 contig-75000034 1615 nucleotides
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
53 TATCTCCACACCACCGGCCTTTACCGGGAGGTGAAGAAGACAGAGGCCGCCGGCCTCCAT
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
54 ACGGAAGGCCTGCGCGTATCCATGGAGGAACTGAAGAAAC
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
55 >contig-75000034_read_8 contig-75000034 1615 nucleotides
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
56 CCTGTTTAAACTGCGGATGCATTCCTACGAAAACGTATCTCCACACCACCGGCCTTTACC
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
57 GGGAGGTGAAGAAGACAGAGGCCGCCGGCCTCCATACGGA
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
58 >contig-75000034_read_9 contig-75000034 1615 nucleotides
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
59 AAGGGCGGTCAAAAAGCTGGGTGTAAATGCAGAACGGACCGGCCGCAATGATATCACAGT
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
60 GGATGGCCGCAAGTTTTCCGGCAACGCGTACTACGAGACC
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
61 >contig-200000042_read_0 contig-200000042 1043 nucleotides
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
62 CATCCGTGGTTTCTGGCAGCAAAAGCTTCTACTGAGAGCGAATATCGCAATTACTACATA
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
63 TTCTCTCAAGACCCGGAAGCTGACATCAAGGCAGGAAAAA
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
64 >contig-200000042_read_1 contig-200000042 1043 nucleotides
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
65 ACTATGTTCGGCAGGACTGTTTACTTGACACGCAAACGTTTTCGTAGATTAACCGTGTTT
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
66 TTTCGTTACACTTGGTCTATCGGCTTCTTTTTCTTCTCTA
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
67 >contig-200000042_read_2 contig-200000042 1043 nucleotides
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
68 ACTCTCCATCCCCAACATGGCGGTTCGCGTCACTCTCCATTAAACTCGTATCGAAAATGT
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
69 GTGAAACATCACATTTCCGGTATGAAAATATGATTGACTA
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
70 >contig-200000042_read_3 contig-200000042 1043 nucleotides
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
71 ACTTCATCAGTCTGCTCTACTACTTCGGAATGCTCACCATCAGCGGCACGCACGAAGGTA
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
72 AGACAAAACTCTCCATCCCCAACATGGCGGTTCGCGTCAC
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
73 >contig-200000042_read_4 contig-200000042 1043 nucleotides
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
74 TGTGAAGGCTATCTGGCTTTCTCCTATTCATCCGTCGCCTTCGTATCATGGCTATGATGT
6302656ed45d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
iuc
parents:
diff changeset
75 GACGGATTATACGAAGGTGAATCAAAAGTTTGGTACAGAG