Mercurial > repos > iuc > concoct_coverage_table

diff test-data/ten_reads.fa @ 2:6302656ed45d draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 1a79c139165648b969d82530784cea3fc8f2d2c0"
author iuc
date Thu, 07 Jul 2022 08:32:46 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/ten_reads.fa	Thu Jul 07 08:32:46 2022 +0000
@@ -0,0 +1,75 @@
+>contig-21000001_read_0 contig-21000001 9998 nucleotides
+TTTCTCTCCCAGTCGTCGATCCGGTCTGTTTCAAAATAGAGCTGAAAGTTATTTGCTGCT
+GTCTTTCTGTTCAGTGATTTACCGATCATTGCTTCGTAGT
+>contig-21000001_read_1 contig-21000001 9998 nucleotides
+GAGTCAGTCAGACGGCTGGCCCCGGAAATACCAGCAGCAATGGAGAAAATCCATCCTCCC
+CGCCTGGAAGCGAAAGCAGAAATGACCAAATACCAGCGGC
+>contig-21000001_read_2 contig-21000001 9998 nucleotides
+TTTCAGAGAGGCTGTTTGAGTACTCCCATCCCCTGGGGGACAGAGGGCAGATTCTGGCCG
+CTTCCCGGTGGCTGCAGCGGTTTGGCCTGGAGGCCAATGA
+>contig-21000001_read_3 contig-21000001 9998 nucleotides
+ACGATCACAAAAGGTCATTACGGCTGGCTGATTGATAAGGAGGCGGAAACGGAGGCTCTG
+TTGGAAATAATCAGATCCGGTGAAAGTCAGGAGCGGGAGC
+>contig-21000001_read_4 contig-21000001 9998 nucleotides
+TAAAATGGTGCTGTTTCATGGATTCAACCATCTGTTCGATCTCATCCTCCATGGACAGGG
+CCTGGTCGGAGGCAATGATGTGCAGATACTCCTCTTCACA
+>contig-21000001_read_5 contig-21000001 9998 nucleotides
+CAGTGCAGTCAGCCAGTTAAAGGATTTGATTACGGAAAATAAAGTGGTTCTTGTTAACGA
+AAGTGGTTTGGACAGCAAGGTACGAGCAATCTATGATGCA
+>contig-21000001_read_6 contig-21000001 9998 nucleotides
+AGTGAGAAAAAAGCAAATAGATTTGCAGCAGAATTTCTTGTGGATGAATTATTGCTGAAA
+CAGGAAATCGAGTTATATAAAATTAAGAAGCTTACAATAA
+>contig-21000001_read_7 contig-21000001 9998 nucleotides
+TGGTAGAAAAATAATTATTGATGCAGATTTATGTATCAAGTTGGGAGGAAGTAATAAGTA
+TAGATATTTGCATGATGTGCTTCCTTTGATTGCAAAAGAG
+>contig-21000001_read_8 contig-21000001 9998 nucleotides
+TTTTCCAATGTGAAGATTGAGCCGCTGTTTGAAGAGATGGTGGATTTTGAGACTTTCTCA
+AAGTCTGATTACCGTGCAGTGAAGATCAAAGACTGCGTGG
+>contig-21000001_read_9 contig-21000001 9998 nucleotides
+TCCACTCCTTCGATGGCCTCCAGCTTTCTCTCCCAGTCGTCGATCCGGTCTGTTTCAAAA
+TAGAGCTGAAAGTTATTTGCTGCTGTCTTTCTGTTCAGTG
+>contig-75000034_read_0 contig-75000034 1615 nucleotides
+TTTTACCTTCATCACAAGAAAAGATAACTACGATGTCACAAAACAGACGGAGGTTATCCT
+AAGGGCGGTCAAAAAGCTGGGTGTAAATGCAGAACGGACC
+>contig-75000034_read_1 contig-75000034 1615 nucleotides
+CAGGATTTACAGGATCTGGTCTGCGATATGATGTAGTGCTGTGCCGTCGATTCACAGACG
+CGCCTGAGAGAACAGGAGGATTGGATGGAAAAACATTATG
+>contig-75000034_read_2 contig-75000034 1615 nucleotides
+GGAAATACGGCAGGAAGATCCCGTTCAGCGATGAAGCCGCCGCCCGTTTTACCTGGGGGG
+AGGCCCAGGTGCTGGTCCATGTGGAAGAGGGGCGTGTCCG
+>contig-75000034_read_3 contig-75000034 1615 nucleotides
+ATTGTCCACGAGGCCCTGATGGTGGAGCCGACGGAGACGGAATCAAAGGAGAACTTAGAT
+GAACTGATCGCCGTGTTCCACGAGATCTATGAGACGGCGA
+>contig-75000034_read_4 contig-75000034 1615 nucleotides
+ATCCCAATTTCGGCATGGAGGAGTATTTGCTTTACGATGTGGAAGAAGAGGAATGCATTC
+TCTACCTGTGGCAGAATGAGAAAACCGTGGTCATAGGCAG
+>contig-75000034_read_5 contig-75000034 1615 nucleotides
+TACCCCTATCCCAATTTCGGCATGGAGGAGTATTTGCTTTACGATGTGGAAGAAGAGGAA
+TGCATTCTCTACCTGTGGCAGAATGAGAAAACCGTGGTCA
+>contig-75000034_read_6 contig-75000034 1615 nucleotides
+ATCAAAGGAGAACTTAGATGAACTGATCGCCGTGTTCCACGAGATCTATGAGACGGCGAA
+GCGTGATCCCGAATATATCCGGAGCTCCCCCCACATCACC
+>contig-75000034_read_7 contig-75000034 1615 nucleotides
+TATCTCCACACCACCGGCCTTTACCGGGAGGTGAAGAAGACAGAGGCCGCCGGCCTCCAT
+ACGGAAGGCCTGCGCGTATCCATGGAGGAACTGAAGAAAC
+>contig-75000034_read_8 contig-75000034 1615 nucleotides
+CCTGTTTAAACTGCGGATGCATTCCTACGAAAACGTATCTCCACACCACCGGCCTTTACC
+GGGAGGTGAAGAAGACAGAGGCCGCCGGCCTCCATACGGA
+>contig-75000034_read_9 contig-75000034 1615 nucleotides
+AAGGGCGGTCAAAAAGCTGGGTGTAAATGCAGAACGGACCGGCCGCAATGATATCACAGT
+GGATGGCCGCAAGTTTTCCGGCAACGCGTACTACGAGACC
+>contig-200000042_read_0 contig-200000042 1043 nucleotides
+CATCCGTGGTTTCTGGCAGCAAAAGCTTCTACTGAGAGCGAATATCGCAATTACTACATA
+TTCTCTCAAGACCCGGAAGCTGACATCAAGGCAGGAAAAA
+>contig-200000042_read_1 contig-200000042 1043 nucleotides
+ACTATGTTCGGCAGGACTGTTTACTTGACACGCAAACGTTTTCGTAGATTAACCGTGTTT
+TTTCGTTACACTTGGTCTATCGGCTTCTTTTTCTTCTCTA
+>contig-200000042_read_2 contig-200000042 1043 nucleotides
+ACTCTCCATCCCCAACATGGCGGTTCGCGTCACTCTCCATTAAACTCGTATCGAAAATGT
+GTGAAACATCACATTTCCGGTATGAAAATATGATTGACTA
+>contig-200000042_read_3 contig-200000042 1043 nucleotides
+ACTTCATCAGTCTGCTCTACTACTTCGGAATGCTCACCATCAGCGGCACGCACGAAGGTA
+AGACAAAACTCTCCATCCCCAACATGGCGGTTCGCGTCAC
+>contig-200000042_read_4 contig-200000042 1043 nucleotides
+TGTGAAGGCTATCTGGCTTTCTCCTATTCATCCGTCGCCTTCGTATCATGGCTATGATGT
+GACGGATTATACGAAGGTGAATCAAAAGTTTGGTACAGAG