Mercurial > repos > iuc > concoct_extract_fasta_bins

comparison extract_fasta_bins.xml @ 1:a04028a8181d draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 40a09cbfd6052f7b0295946621db1bdf58228b09"
author iuc
date Sun, 13 Mar 2022 08:44:08 +0000
parents 1bc8fd1b3ed0
children bcd8d64f82b7
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0:1bc8fd1b3ed0 1:a04028a8181d
1 <tool id="concoct_extract_fasta_bins" name="Extract a fasta file" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@"> 1 <tool id="concoct_extract_fasta_bins" name="CONCOCT: extract a fasta file" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@">
2 <description>for each cluster in a CONCOCT clustering file</description> 2 <description>for each cluster</description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="requirements"/> 6 <expand macro="requirements"/>
7 <command detect_errors="exit_code"><![CDATA[ 7 <command detect_errors="exit_code"><![CDATA[
51 Performs metagenomic binning of fasta contigs by extracting a fasta file for each cluster defined in a 51 Performs metagenomic binning of fasta contigs by extracting a fasta file for each cluster defined in a
52 CONCOCT clustering file. 52 CONCOCT clustering file.
53 53
54 The tool accepts two inputs; the fasta contigs file and the CONCOCT clustering file that was produced using 54 The tool accepts two inputs; the fasta contigs file and the CONCOCT clustering file that was produced using
55 the same fasta contigs input. A collection of fasta files is produced. 55 the same fasta contigs input. A collection of fasta files is produced.
56
57 @HELP_OVERVIEW@
56 ]]></help> 58 ]]></help>
57 <expand macro="citations"/> 59 <expand macro="citations"/>
58 </tool> 60 </tool>