Mercurial > repos > iuc > crossmap_bam
annotate README.rst @ 8:e13f565068d6 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit b450d8cda28c53ee5dbd4bc2582a589f44bf6fea"
author | iuc |
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date | Wed, 24 Nov 2021 22:00:20 +0000 |
parents | d04d5afec2e0 |
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d04d5afec2e0
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit d578fad97ce545d68dde40155d36426a121e4447
iuc
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1 CrossMap wrapper for Galaxy |
d04d5afec2e0
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit d578fad97ce545d68dde40155d36426a121e4447
iuc
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2 =========================== |
d04d5afec2e0
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit d578fad97ce545d68dde40155d36426a121e4447
iuc
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3 |
d04d5afec2e0
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit d578fad97ce545d68dde40155d36426a121e4447
iuc
parents:
diff
changeset
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4 CrossMap is versatile tool to convert genome coordinates or annotation files between genome |
d04d5afec2e0
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit d578fad97ce545d68dde40155d36426a121e4447
iuc
parents:
diff
changeset
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5 assemblies. It supports mostly commonly used file types, including BAM, BED,BigWig, GFF, |
d04d5afec2e0
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit d578fad97ce545d68dde40155d36426a121e4447
iuc
parents:
diff
changeset
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6 GTF, SAM, Wiggle, and VCF formats. For large plain text file types, such as BED, GFF, GTF |
d04d5afec2e0
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit d578fad97ce545d68dde40155d36426a121e4447
iuc
parents:
diff
changeset
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7 and VCF, reading from remote servers and file compression are supported. |