Mercurial > repos > iuc > crossmap_bam

comparison test-data/test_vcf_01_input.vcf @ 9:158b5b2a164a draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit e10d34b547557b2bd4f0be69e31204bd5703e422"
author iuc
date Thu, 20 Jan 2022 04:33:19 +0000
parents d04d5afec2e0
children
comparison
equal deleted inserted replaced
8:e13f565068d6 9:158b5b2a164a
1 ##fileformat=VCFv4.2 1 ##fileformat=VCFv4.2
2 ##FORMAT=<ID=GT,Number=1,Type=Integer,Description="Genotype"> 2 ##FORMAT=<ID=GT,Number=1,Type=Integer,Description="Genotype">
3 ##FORMAT=<ID=GP,Number=G,Type=Float,Description="Genotype Probabilities"> 3 ##FORMAT=<ID=GP,Number=G,Type=Float,Description="Genotype Probabilities">
4 ##FORMAT=<ID=PL,Number=G,Type=Float,Description="Phred-scaled Genotype Likelihoods"> 4 ##FORMAT=<ID=PL,Number=G,Type=Float,Description="Phred-scaled Genotype Likelihoods">
5 ##contig=<ID=1,length=195471971>
5 #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT SAMP001 SAMP002 6 #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT SAMP001 SAMP002
6 1 10 rs11449 G A . PASS . GT 0/0 0/1 7 1 10 rs11449 G A . PASS . GT 0/0 0/1
7 1 100 rs84825 C C . PASS . GT:GP 0/1:. 0/1:0.03,0.97,0 8 1 100 rs84825 C C . PASS . GT:GP 0/1:. 0/1:0.03,0.97,0
8 1 200 rs84823 T G . PASS . GT:PL ./.:. 1/1:10,5,0 9 1 200 rs84823 T G . PASS . GT:PL ./.:. 1/1:10,5,0