Mercurial > repos > iuc > crossmap_bam

diff crossmap_bam.xml @ 7:e5340c09200a draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit f436317e2f8d451621e297cfc474e43c20d60bb7"
author iuc
date Thu, 15 Jul 2021 16:18:13 +0000
parents 5051467dc96a
children e13f565068d6
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line diff
--- a/crossmap_bam.xml	Wed Sep 30 14:00:15 2020 +0000
+++ b/crossmap_bam.xml	Thu Jul 15 16:18:13 2021 +0000
@@ -1,4 +1,4 @@
-<tool id="crossmap_bam" name="CrossMap BAM" version="@WRAPPER_VERSION@">
+<tool id="crossmap_bam" name="CrossMap BAM" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="20.05">
     <description>Convert genome coordinates or annotation files between genome assemblies</description>
     <macros>
         <import>macros.xml</import>
@@ -46,7 +46,7 @@
             <param name="input_chain" value="aToB.over.chain" ftype="csv"/>
             <param name="include_fails" value="False"/>
 
-            <output name="output" file="test_bam_01_output_a.bam" ftype="bam" />
+            <output name="output" file="test_bam_01_output_a.bam" ftype="bam" lines_diff="4" />
         </test>
         <test>
             <param name="index_source" value="cached"/>
@@ -54,7 +54,7 @@
             <param name="input" value="test_bam_01_input_a.bam" ftype="bam" dbkey="hg18"/>
             <param name="include_fails" value="False"/>
 
-            <output name="output" file="test_bam_01_output_a.bam" ftype="bam" />
+            <output name="output" file="test_bam_01_output_a.bam" ftype="bam" lines_diff="4" />
         </test>
     </tests>
     <help><![CDATA[