annotate README.rst @ 5:97979c3d179f draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit 851f81495c875ac09d936537ffd2b32e6af2c8c5"
author iuc
date Thu, 17 Oct 2019 02:56:14 -0400
parents 734eedede47c
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
734eedede47c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit d578fad97ce545d68dde40155d36426a121e4447
iuc
parents:
diff changeset
1 CrossMap wrapper for Galaxy
734eedede47c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit d578fad97ce545d68dde40155d36426a121e4447
iuc
parents:
diff changeset
2 ===========================
734eedede47c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit d578fad97ce545d68dde40155d36426a121e4447
iuc
parents:
diff changeset
3
734eedede47c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit d578fad97ce545d68dde40155d36426a121e4447
iuc
parents:
diff changeset
4 CrossMap is versatile tool to convert genome coordinates or annotation files between genome
734eedede47c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit d578fad97ce545d68dde40155d36426a121e4447
iuc
parents:
diff changeset
5 assemblies. It supports mostly commonly used file types, including BAM, BED,BigWig, GFF,
734eedede47c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit d578fad97ce545d68dde40155d36426a121e4447
iuc
parents:
diff changeset
6 GTF, SAM, Wiggle, and VCF formats. For large plain text file types, such as BED, GFF, GTF
734eedede47c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit d578fad97ce545d68dde40155d36426a121e4447
iuc
parents:
diff changeset
7 and VCF, reading from remote servers and file compression are supported.