Mercurial > repos > iuc > crossmap_vcf

diff test-data/test_vcf_01_input.vcf @ 0:734eedede47c draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit d578fad97ce545d68dde40155d36426a121e4447
author iuc
date Tue, 26 Sep 2017 05:45:41 -0400
parents
children 18f7e96459d2
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/test_vcf_01_input.vcf	Tue Sep 26 05:45:41 2017 -0400
@@ -0,0 +1,8 @@
+##fileformat=VCFv4.2
+##FORMAT=<ID=GT,Number=1,Type=Integer,Description="Genotype">
+##FORMAT=<ID=GP,Number=G,Type=Float,Description="Genotype Probabilities">
+##FORMAT=<ID=PL,Number=G,Type=Float,Description="Phred-scaled Genotype Likelihoods">
+#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	SAMP001	SAMP002
+1	10	rs11449	G	A	.	PASS	.	GT	0/0	0/1
+1	100 rs84825 C	C	.	PASS	.	GT:GP	0/1:.	0/1:0.03,0.97,0
+1	200 rs84823 T	G	.	PASS	.	GT:PL	./.:.	1/1:10,5,0