Mercurial > repos > iuc > customize_metaphlan_database

comparison macros.xml @ 11:a755466eb47c draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/metaphlan/ commit 3c1a0c4a94f78437c6df74b5348826e33e734a05
author iuc
date Mon, 29 Jul 2024 07:14:38 +0000
parents 254cb00a578f
children
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10:254cb00a578f 11:a755466eb47c
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <macros> 2 <macros>
3 <token name="@TOOL_VERSION@">4.0.6</token> 3 <token name="@TOOL_VERSION@">4.1.1</token>
4 <token name="@VERSION_SUFFIX@">3</token> 4 <token name="@VERSION_SUFFIX@">0</token>
5 <token name="@PROFILE@">22.05</token> 5 <token name="@PROFILE@">22.05</token>
6 <!-- Metaphlan DB compatible with this version of Metaphlan 6 <!-- Metaphlan DB compatible with this version of Metaphlan
7 v4 introduced single genome level bins (SGB) and the index syntax differs from previous versions --> 7 v4 introduced single genome level bins (SGB) and the index syntax differs from previous versions -->
8 <token name="@IDX_VERSION@">SGB</token> 8 <token name="@IDX_VERSION@">SGB</token>
9 <token name="@IDX_DATA_TABLE@">metaphlan_database_versioned</token> 9 <token name="@IDX_DATA_TABLE@">metaphlan_database_versioned</token>
21 <xml name="citations"> 21 <xml name="citations">
22 <citations> 22 <citations>
23 <citation type="doi">10.7554/eLife.65088</citation> 23 <citation type="doi">10.7554/eLife.65088</citation>
24 </citations> 24 </citations>
25 </xml> 25 </xml>
26
27 <xml name="subsample_common">
28 <param argument="--mapping_subsampling" type="boolean" truevalue="--mapping_subsampling" falsevalue="" label="Subsampling on the mapping results" help="instead of on the reads"/>
29 <param argument="--subsampling_seed" type="integer" optional="true" label="Subsampling seed" help="No value: random"/>
30 </xml>
26 </macros> 31 </macros>