Mercurial > repos > iuc > customize_metaphlan_database
comparison macros.xml @ 11:a755466eb47c draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/metaphlan/ commit 3c1a0c4a94f78437c6df74b5348826e33e734a05
author | iuc |
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date | Mon, 29 Jul 2024 07:14:38 +0000 |
parents | 254cb00a578f |
children |
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10:254cb00a578f | 11:a755466eb47c |
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1 <?xml version="1.0"?> | 1 <?xml version="1.0"?> |
2 <macros> | 2 <macros> |
3 <token name="@TOOL_VERSION@">4.0.6</token> | 3 <token name="@TOOL_VERSION@">4.1.1</token> |
4 <token name="@VERSION_SUFFIX@">3</token> | 4 <token name="@VERSION_SUFFIX@">0</token> |
5 <token name="@PROFILE@">22.05</token> | 5 <token name="@PROFILE@">22.05</token> |
6 <!-- Metaphlan DB compatible with this version of Metaphlan | 6 <!-- Metaphlan DB compatible with this version of Metaphlan |
7 v4 introduced single genome level bins (SGB) and the index syntax differs from previous versions --> | 7 v4 introduced single genome level bins (SGB) and the index syntax differs from previous versions --> |
8 <token name="@IDX_VERSION@">SGB</token> | 8 <token name="@IDX_VERSION@">SGB</token> |
9 <token name="@IDX_DATA_TABLE@">metaphlan_database_versioned</token> | 9 <token name="@IDX_DATA_TABLE@">metaphlan_database_versioned</token> |
21 <xml name="citations"> | 21 <xml name="citations"> |
22 <citations> | 22 <citations> |
23 <citation type="doi">10.7554/eLife.65088</citation> | 23 <citation type="doi">10.7554/eLife.65088</citation> |
24 </citations> | 24 </citations> |
25 </xml> | 25 </xml> |
26 | |
27 <xml name="subsample_common"> | |
28 <param argument="--mapping_subsampling" type="boolean" truevalue="--mapping_subsampling" falsevalue="" label="Subsampling on the mapping results" help="instead of on the reads"/> | |
29 <param argument="--subsampling_seed" type="integer" optional="true" label="Subsampling seed" help="No value: random"/> | |
30 </xml> | |
26 </macros> | 31 </macros> |