Mercurial > repos > iuc > customize_metaphlan_database
view macros.xml @ 11:a755466eb47c draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/metaphlan/ commit 3c1a0c4a94f78437c6df74b5348826e33e734a05
author | iuc |
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date | Mon, 29 Jul 2024 07:14:38 +0000 |
parents | 254cb00a578f |
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<?xml version="1.0"?> <macros> <token name="@TOOL_VERSION@">4.1.1</token> <token name="@VERSION_SUFFIX@">0</token> <token name="@PROFILE@">22.05</token> <!-- Metaphlan DB compatible with this version of Metaphlan v4 introduced single genome level bins (SGB) and the index syntax differs from previous versions --> <token name="@IDX_VERSION@">SGB</token> <token name="@IDX_DATA_TABLE@">metaphlan_database_versioned</token> <xml name="edam_ontology"> <xrefs> <xref type="bio.tools">metaphlan</xref> </xrefs> </xml> <xml name="requirements"> <requirements> <requirement type="package" version="@TOOL_VERSION@">metaphlan</requirement> <yield/> </requirements> </xml> <xml name="citations"> <citations> <citation type="doi">10.7554/eLife.65088</citation> </citations> </xml> <xml name="subsample_common"> <param argument="--mapping_subsampling" type="boolean" truevalue="--mapping_subsampling" falsevalue="" label="Subsampling on the mapping results" help="instead of on the reads"/> <param argument="--subsampling_seed" type="integer" optional="true" label="Subsampling seed" help="No value: random"/> </xml> </macros>