Mercurial > repos > iuc > dada2_mergepairs

diff dada2_mergePairs.xml @ 1:b1e55c248f17 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/dada2 commit a82e4981dac025c909244acd7127c215bdb519a7"
author iuc
date Thu, 05 Dec 2019 18:01:42 -0500
parents 805daed21ef3
children 69900ffd3b8e
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--- a/dada2_mergePairs.xml	Fri Nov 08 18:51:19 2019 -0500
+++ b/dada2_mergePairs.xml	Thu Dec 05 18:01:42 2019 -0500
@@ -44,7 +44,7 @@
             <param name="derepF" ftype="fastq.gz" value="filterAndTrim_F3D0_R1.fq.gz"/>
             <param name="dadaR" ftype="dada2_dada" value="dada_F3D0_R2.Rdata"/>
             <param name="derepR" ftype="fastq.gz" value="filterAndTrim_F3D0_R2.fq.gz"/>
-            <output name="merged" value="mergePairs_F3D0.Rdata" ftype="dada2_mergepairs" />
+            <output name="merged" value="mergePairs_F3D0.Rdata" ftype="dada2_mergepairs" compare="sim_size" delta="400" />
         </test>
         <!-- test non-default options -->
         <test>
@@ -52,7 +52,7 @@
             <param name="derepF" ftype="fastq.gz" value="filterAndTrim_F3D0_R1.fq.gz"/>
             <param name="dadaR" ftype="dada2_dada" value="dada_F3D0_R2.Rdata"/>
             <param name="derepR" ftype="fastq.gz" value="filterAndTrim_F3D0_R2.fq.gz"/>
-            <output name="merged" value="mergePairs_F3D0_nondefault.Rdata" ftype="dada2_mergepairs" />
+            <output name="merged" value="mergePairs_F3D0_nondefault.Rdata" ftype="dada2_mergepairs" compare="sim_size" delta="700"/>
             <param name="minOverlap" value="8" />
             <param name="maxMismatch" value="1"/>
             <param name="justConcatenate" value="TRUE" />