Mercurial > repos > iuc > data_manager_bowtie_index_builder

comparison data_manager/bowtie_index_builder.py @ 3:ea5faedd0795 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_bowtie_index_builder commit 8652f36a3a3838dca989426961561e81432acf4f
author iuc
date Tue, 04 Apr 2017 18:06:27 -0400
parents 086edfff112b
children 86e9af693a33
comparison
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2:086edfff112b 3:ea5faedd0795
89 build_bowtie_index( data_manager_dict, options.fasta_filename, params, target_directory, dbkey, sequence_id, sequence_name, data_table_name=options.data_table_name or DEFAULT_DATA_TABLE_NAME, color_space=options.color_space ) 89 build_bowtie_index( data_manager_dict, options.fasta_filename, params, target_directory, dbkey, sequence_id, sequence_name, data_table_name=options.data_table_name or DEFAULT_DATA_TABLE_NAME, color_space=options.color_space )
90 90
91 # save info to json file 91 # save info to json file
92 open( filename, 'wb' ).write( json.dumps( data_manager_dict ) ) 92 open( filename, 'wb' ).write( json.dumps( data_manager_dict ) )
93 93
94
94 if __name__ == "__main__": 95 if __name__ == "__main__":
95 main() 96 main()