Mercurial > repos > iuc > data_manager_cat

annotate data_manager_conf.xml @ 2:472dabcb03bf draft default tip

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planemo upload commit 09b56ef3e09ad6c5923c88616fea5cbd77d87616
author iuc
date Mon, 18 Dec 2023 09:36:10 +0000
parents cffd8e2382cf
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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cffd8e2382cf "planemo upload commit 4e5a8d7629d90c41219b48b648dd4ab675b84af0"
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1 <?xml version="1.0"?>
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2 <data_managers>
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3 <data_manager tool_file="data_manager/data_manager_cat.xml" id="data_manager_cat" >
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4 <data_table name="cat_database"> <!-- Defines a Data Table to be modified. -->
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5 <output> <!-- Handle the output of the Data Manager Tool -->
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6 <column name="value" /> <!-- columns that are going to be specified by the Data Manager Tool -->
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7 <column name="name" /> <!-- columns that are going to be specified by the Data Manager Tool -->
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8 <column name="database_folder" output_ref="out_file" >
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9 <move type="directory" relativize_symlinks="True">
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10 <src>${database_folder}</src>
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11 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">CAT/${database_folder}</target>
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12 </move>
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13 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/CAT/${database_folder}</value_translation>
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14 <value_translation type="function">abspath</value_translation>
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15 </column>
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16 <column name="taxonomy_folder" output_ref="out_file" >
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17 <move type="directory" relativize_symlinks="True">
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18 <src>${taxonomy_folder}</src>
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19 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">CAT/${taxonomy_folder}</target>
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20 </move>
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21 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/CAT/${taxonomy_folder}</value_translation>
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22 <value_translation type="function">abspath</value_translation>
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23 </column>
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24 </output>
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25 </data_table>
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26 </data_manager>
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27 </data_managers>