Mercurial > repos > iuc > data_manager_dada2
diff data_manager_conf.xml @ 0:f57c13f5878b draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_dada2 commit f8b6b6e72914ad6bcca8423dfa03f59bde80992e"
| author | iuc |
|---|---|
| date | Fri, 08 Nov 2019 18:47:32 -0500 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/data_manager_conf.xml Fri Nov 08 18:47:32 2019 -0500 @@ -0,0 +1,34 @@ +<?xml version="1.0"?> +<data_managers> + <data_manager tool_file="data_manager/dada2_fetcher.xml" id="dada2_fetcher"> + <data_table name="dada2_taxonomy"> + <output> + <column name="value" /> + <column name="name" /> + <column name="path" output_ref="out_file"> + <move type="file" relativize_symlinks="True"> + <source>${path}</source> + <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">dada2/${path}</target> + </move> + <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/dada2/${path}</value_translation> + <value_translation type="function">abspath</value_translation> + </column> + <column name="taxlevels" /> + </output> + </data_table> + <data_table name="dada2_species"> + <output> + <column name="value" /> + <column name="name" /> + <column name="path" output_ref="out_file"> + <move type="file" relativize_symlinks="True"> + <source>${path}</source> + <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">dada2/${path}</target> + </move> + <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/dada2/${path}</value_translation> + <value_translation type="function">abspath</value_translation> + </column> + </output> + </data_table> + </data_manager> +</data_managers>