# HG changeset patch
# User iuc
# Date 1606049250 0
# Node ID 38ccd45899905643270ab138fec032dc2f4833cf
# Parent  c292754960619fcf7edc59adf7aeb4c836c971a5
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_dada2 commit 02d2967f77e3fa5a18aea63dc84aa9ab418dc165"

diff -r c29275496061 -r 38ccd4589990 data_manager/data_manager.py
--- a/data_manager/data_manager.py	Tue Jul 14 07:37:09 2020 -0400
+++ b/data_manager/data_manager.py	Sun Nov 22 12:47:30 2020 +0000
@@ -100,8 +100,8 @@
 
 def remote_dataset(dataset, outjson):
 
-    with open(outjson) as jf:
-        params = json.loads(jf.read())
+    with open(outjson) as fh:
+        params = json.load(fh)
 
     workdir = params['output_data'][0]['extra_files_path']
     os.mkdir(workdir)
@@ -123,8 +123,8 @@
         data_manager_entry['path'] = dataset + ".species"
         data_manager_json["data_tables"]["dada2_species"] = data_manager_entry
 
-    with open(outjson, 'w') as jf:
-        jf.write(json.dumps(data_manager_json, sort_keys=True))
+    with open(outjson, 'w') as fh:
+        json.dump(data_manager_json, fh, sort_keys=True)
 
 
 if __name__ == '__main__':