Mercurial > repos > iuc > data_manager_dram_database_downloader

annotate test-data/dram_databases.loc @ 1:40c8fc0a2bb0 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_dram_database_downloader commit 08664fb0e31a61514b787021d54ee5464be6043d
author iuc
date Tue, 13 Sep 2022 09:08:55 +0000
parents bd342a6a5b0f
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
bd342a6a5b0f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_dram_database_downloader commit 52575ece22fcdbb6fc3aa3582ea377075aaa4db1
iuc
parents:
diff changeset
1 # This is a sample file distributed with Galaxy that enables tools
bd342a6a5b0f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_dram_database_downloader commit 52575ece22fcdbb6fc3aa3582ea377075aaa4db1
iuc
parents:
diff changeset
2 # to use a directory of DRAM databases. The dram_databases.loc
bd342a6a5b0f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_dram_database_downloader commit 52575ece22fcdbb6fc3aa3582ea377075aaa4db1
iuc
parents:
diff changeset
3 # file has this format (longer white space characters are TAB characters):
bd342a6a5b0f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_dram_database_downloader commit 52575ece22fcdbb6fc3aa3582ea377075aaa4db1
iuc
parents:
diff changeset
4 #
bd342a6a5b0f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_dram_database_downloader commit 52575ece22fcdbb6fc3aa3582ea377075aaa4db1
iuc
parents:
diff changeset
5 # <db_version> <display_name> <directory_path>
bd342a6a5b0f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_dram_database_downloader commit 52575ece22fcdbb6fc3aa3582ea377075aaa4db1
iuc
parents:
diff changeset
6 #
bd342a6a5b0f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_dram_database_downloader commit 52575ece22fcdbb6fc3aa3582ea377075aaa4db1
iuc
parents:
diff changeset
7 # So, for example, if you have the DRAM databases stored in
bd342a6a5b0f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_dram_database_downloader commit 52575ece22fcdbb6fc3aa3582ea377075aaa4db1
iuc
parents:
diff changeset
8 # /depot/data2/galaxy/dram/,
bd342a6a5b0f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_dram_database_downloader commit 52575ece22fcdbb6fc3aa3582ea377075aaa4db1
iuc
parents:
diff changeset
9 # then the gtdbtk_databases.loc entry would look like this:
bd342a6a5b0f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_dram_database_downloader commit 52575ece22fcdbb6fc3aa3582ea377075aaa4db1
iuc
parents:
diff changeset
10 #
bd342a6a5b0f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_dram_database_downloader commit 52575ece22fcdbb6fc3aa3582ea377075aaa4db1
iuc
parents:
diff changeset
11 # 3.5.1 DRAM database /depot/data2/galaxy/dram
bd342a6a5b0f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_dram_database_downloader commit 52575ece22fcdbb6fc3aa3582ea377075aaa4db1
iuc
parents:
diff changeset
12 3.5.1 DRAM 3.5.1 databases ${__HERE__}