Mercurial > repos > iuc > data_manager_fetch_busco

diff data_manager_conf.xml @ 7:8ef19ca5d289 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_busco/ commit 32f1099f18b41bf1efd1a039daf732809c77269e
author iuc
date Tue, 22 Apr 2025 13:11:57 +0000
parents 6ab91825be22
children
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line diff
--- a/data_manager_conf.xml	Fri Apr 04 11:18:19 2025 +0000
+++ b/data_manager_conf.xml	Tue Apr 22 13:11:57 2025 +0000
@@ -1,12 +1,18 @@
 <data_managers>
-    <data_manager tool_file="data_manager/busco_options.xml" id="busco_fetcher_options" version="5.4.6+galaxy0">
-        <data_table name="busco_database_options">
+    <data_manager tool_file="data_manager/busco_fetcher.xml" id="busco_fetcher" version="5.4.6+galaxy0">
+        <data_table name="busco_database">
             <output>
                 <column name="value" />
                 <column name="name" />
-                <column name="db_value"/>
+                <column name="version"/>
+                <column name="path" output_ref="out_file">
+                    <move type="directory" relativize_symlinks="True">
+                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">busco/${value}</target>
+                    </move>
+                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/busco/${value}</value_translation>
+                    <value_translation type="function">abspath</value_translation>
+                </column>
             </output>
         </data_table>
-
     </data_manager>
 </data_managers>