Mercurial > repos > iuc > data_manager_groot_database_downloader

diff data_manager_conf.xml @ 0:641ac96ab63a draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_groot_database_downloader commit d98a90741c13f19c9eb78df37d142f8f73f20211
author iuc
date Thu, 17 Oct 2024 14:20:17 +0000
parents
children 0c255951902a
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/data_manager_conf.xml	Thu Oct 17 14:20:17 2024 +0000
@@ -0,0 +1,20 @@
+<?xml version="1.0"?>
+<data_managers>
+    <data_manager tool_file="data_manager/data_manager_groot_database_downloader.xml" id="groot_database_downloader">
+        <data_table name="groot_database">
+            <output>
+                <column name="value"/>  <!-- columns that are going to be specified by the Data Manager Tool -->
+                <column name="name"/>  <!-- columns that are going to be specified by the Data Manager Tool -->
+                <column name="path" output_ref="out_file">
+                    <move type="directory">
+                        <source>${path}</source>
+                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">groot_database/data/${value}</target>
+                    </move>
+                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/groot_database/data/${value}</value_translation>
+                    <value_translation type="function">abspath</value_translation>
+                </column>
+                <column name="version"/> <!-- columns that are going to be specified by the Data Manager Tool -->
+            </output>
+        </data_table>
+    </data_manager>
+</data_managers>
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