Mercurial > repos > iuc > data_manager_gtdbtk_database_installer

annotate data_manager_conf.xml @ 10:3a3cb74b3f6e draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_gtdbtk_database_installer commit c63b1bff90ebc5b5df0a4cbd9a294fc1d51583c7
author iuc
date Thu, 09 Oct 2025 08:23:58 +0000
parents 6ab422fba1a3
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629464b96c2e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_gtdbtk_database_installer commit 69da0d34ea6e72c0427ec2d3e882c86cbb90833f
iuc
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1 <data_managers>
629464b96c2e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_gtdbtk_database_installer commit 69da0d34ea6e72c0427ec2d3e882c86cbb90833f
iuc
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2 <data_manager tool_file="data_manager/gtdbtk_database_installer.xml" id="gtdbtk_database_installer">
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6ab422fba1a3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_gtdbtk_database_installer commit ad14947c3e13babe90a6878b45608fe56a16150d
iuc
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3 <data_table name="gtdbtk_database_versioned">
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629464b96c2e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_gtdbtk_database_installer commit 69da0d34ea6e72c0427ec2d3e882c86cbb90833f
iuc
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4 <output>
629464b96c2e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_gtdbtk_database_installer commit 69da0d34ea6e72c0427ec2d3e882c86cbb90833f
iuc
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5 <column name="value"/>
629464b96c2e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_gtdbtk_database_installer commit 69da0d34ea6e72c0427ec2d3e882c86cbb90833f
iuc
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6 <column name="name"/>
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6ab422fba1a3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_gtdbtk_database_installer commit ad14947c3e13babe90a6878b45608fe56a16150d
iuc
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7 <column name="version"/>
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629464b96c2e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_gtdbtk_database_installer commit 69da0d34ea6e72c0427ec2d3e882c86cbb90833f
iuc
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8 <column name="path" output_ref="out_file">
629464b96c2e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_gtdbtk_database_installer commit 69da0d34ea6e72c0427ec2d3e882c86cbb90833f
iuc
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9 <move type="directory" relativize_symlinks="True">
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6ab422fba1a3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_gtdbtk_database_installer commit ad14947c3e13babe90a6878b45608fe56a16150d
iuc
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10 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">gtdbtk_database_versioned/${value}</target>
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629464b96c2e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_gtdbtk_database_installer commit 69da0d34ea6e72c0427ec2d3e882c86cbb90833f
iuc
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11 </move>
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6ab422fba1a3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_gtdbtk_database_installer commit ad14947c3e13babe90a6878b45608fe56a16150d
iuc
parents: 0
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12 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/gtdbtk_database_versioned/${value}</value_translation>
6ab422fba1a3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_gtdbtk_database_installer commit ad14947c3e13babe90a6878b45608fe56a16150d
iuc
parents: 0
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13 <value_translation type="function">abspath</value_translation>
6ab422fba1a3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_gtdbtk_database_installer commit ad14947c3e13babe90a6878b45608fe56a16150d
iuc
parents: 0
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14 </column>
6ab422fba1a3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_gtdbtk_database_installer commit ad14947c3e13babe90a6878b45608fe56a16150d
iuc
parents: 0
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15 </output>
6ab422fba1a3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_gtdbtk_database_installer commit ad14947c3e13babe90a6878b45608fe56a16150d
iuc
parents: 0
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16 </data_table>
6ab422fba1a3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_gtdbtk_database_installer commit ad14947c3e13babe90a6878b45608fe56a16150d
iuc
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17 <data_table name="gtdbtk_database_metadata_versioned">
6ab422fba1a3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_gtdbtk_database_installer commit ad14947c3e13babe90a6878b45608fe56a16150d
iuc
parents: 0
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18 <output>
6ab422fba1a3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_gtdbtk_database_installer commit ad14947c3e13babe90a6878b45608fe56a16150d
iuc
parents: 0
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19 <column name="value"/>
6ab422fba1a3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_gtdbtk_database_installer commit ad14947c3e13babe90a6878b45608fe56a16150d
iuc
parents: 0
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20 <column name="name"/>
6ab422fba1a3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_gtdbtk_database_installer commit ad14947c3e13babe90a6878b45608fe56a16150d
iuc
parents: 0
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21 <column name="version"/>
6ab422fba1a3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_gtdbtk_database_installer commit ad14947c3e13babe90a6878b45608fe56a16150d
iuc
parents: 0
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22 <column name="path" output_ref="out_file">
6ab422fba1a3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_gtdbtk_database_installer commit ad14947c3e13babe90a6878b45608fe56a16150d
iuc
parents: 0
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23 <move type="directory" relativize_symlinks="True">
6ab422fba1a3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_gtdbtk_database_installer commit ad14947c3e13babe90a6878b45608fe56a16150d
iuc
parents: 0
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24 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">gtdbtk_database_metadata_versioned/${value}</target>
6ab422fba1a3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_gtdbtk_database_installer commit ad14947c3e13babe90a6878b45608fe56a16150d
iuc
parents: 0
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25 </move>
6ab422fba1a3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_gtdbtk_database_installer commit ad14947c3e13babe90a6878b45608fe56a16150d
iuc
parents: 0
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26 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/gtdbtk_database_metadata_versioned/${value}</value_translation>
0
629464b96c2e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_gtdbtk_database_installer commit 69da0d34ea6e72c0427ec2d3e882c86cbb90833f
iuc
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27 <value_translation type="function">abspath</value_translation>
629464b96c2e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_gtdbtk_database_installer commit 69da0d34ea6e72c0427ec2d3e882c86cbb90833f
iuc
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28 </column>
629464b96c2e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_gtdbtk_database_installer commit 69da0d34ea6e72c0427ec2d3e882c86cbb90833f
iuc
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29 </output>
629464b96c2e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_gtdbtk_database_installer commit 69da0d34ea6e72c0427ec2d3e882c86cbb90833f
iuc
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30 </data_table>
629464b96c2e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_gtdbtk_database_installer commit 69da0d34ea6e72c0427ec2d3e882c86cbb90833f
iuc
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31 </data_manager>
629464b96c2e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_gtdbtk_database_installer commit 69da0d34ea6e72c0427ec2d3e882c86cbb90833f
iuc
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32 </data_managers>