Mercurial > repos > iuc > data_manager_gtdbtk_database_installer
diff tool-data/gtdbtk_database.loc.sample @ 0:629464b96c2e draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_gtdbtk_database_installer commit 69da0d34ea6e72c0427ec2d3e882c86cbb90833f
| author | iuc |
|---|---|
| date | Thu, 08 Dec 2022 19:26:49 +0000 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool-data/gtdbtk_database.loc.sample Thu Dec 08 19:26:49 2022 +0000 @@ -0,0 +1,25 @@ +# This is a sample file distributed with Galaxy that enables tools +# to use a directory of GTDB-Tk databases. The gtdbtk_databases.loc +# file has this format (longer white space characters are TAB characters): +# +# <unique_build_id> <display_name> <directory_path> +# +# So, for example, if you have the gtdbtk 202 stored in +# /depot/data2/galaxy/gtdbtk/202/, +# then the gtdbtk_databases.loc entry would look like this: +# +# release202 gtdbtk database release 202 /depot/data2/galaxy/gtdbtk/release202 +# +# and your /depot/data2/galaxy/gtdbtk/release202 directory +# would contain GTDB-Tk database files for release 202, sommething like this: +# +#drwxr-sr-x 3 gvk G-824019 4096 Apr 20 2021 fastani/ +#-rw-r--r-- 1 gvk G-824019 4810764 Apr 22 2021 manifest.tsv +#drwxr-sr-x 4 gvk G-824019 4096 Apr 21 2021 markers/ +#drwxr-sr-x 2 gvk G-824019 4096 Apr 20 2021 masks/ +#drwxr-sr-x 2 gvk G-824019 4096 Apr 20 2021 metadata/ +#drwxr-sr-x 2 gvk G-824019 4096 Apr 21 2021 mrca_red/ +#drwxr-sr-x 2 gvk G-824019 4096 Apr 20 2021 msa/ +#drwxr-sr-x 4 gvk G-824019 4096 Apr 21 2021 pplacer/ +#drwxr-sr-x 2 gvk G-824019 4096 Apr 20 2021 radii/ +#drwxr-sr-x 2 gvk G-824019 4096 Apr 20 2021 taxonomy/