Mercurial > repos > iuc > data_manager_hisat2_index_builder
comparison data_manager_conf.xml @ 0:d3eb4d51b285 draft
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/data_managers/data_manager_hisat2_index_builder commit 1e8d3feeb391aabcfff2338b57913138deea51ec-dirty
| author | iuc |
|---|---|
| date | Sat, 10 Oct 2015 14:53:43 -0400 |
| parents | |
| children | d74c740bdb25 |
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| -1:000000000000 | 0:d3eb4d51b285 |
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| 1 <?xml version="1.0"?> | |
| 2 <data_managers> | |
| 3 <data_manager tool_file="data_manager/hisat2_index_builder.xml" id="hisat2_index_builder" version="0.0.1"> | |
| 4 <data_table name="hisat2_indexes"> | |
| 5 <output> | |
| 6 <column name="value" /> | |
| 7 <column name="dbkey" /> | |
| 8 <column name="name" /> | |
| 9 <column name="path" output_ref="out_file" > | |
| 10 <move type="directory" relativize_symlinks="True"> | |
| 11 <!-- <source>${path}</source>--> <!-- out_file.extra_files_path is used as base by default --> <!-- if no source, eg for type=directory, then refers to base --> | |
| 12 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${dbkey}/hisat2_index/${value}</target> | |
| 13 </move> | |
| 14 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${dbkey}/hisat2_index/${value}/${path}</value_translation> | |
| 15 <value_translation type="function">abspath</value_translation> | |
| 16 </column> | |
| 17 </output> | |
| 18 </data_table> | |
| 19 </data_manager> | |
| 20 </data_managers> |