Mercurial > repos > iuc > data_manager_hisat2_index_builder

diff data_manager/hisat2_index_builder.py @ 1:b13b84cb11b5 draft

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planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/data_managers/data_manager_hisat2_index_builder commit feb20045fb10de6cce2517784f52672322d4d9f8-dirty
author iuc
date Sat, 10 Oct 2015 16:01:18 -0400
parents d3eb4d51b285
children 98a60a4cfb9a
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line diff
--- a/data_manager/hisat2_index_builder.py	Sat Oct 10 14:53:43 2015 -0400
+++ b/data_manager/hisat2_index_builder.py	Sat Oct 10 16:01:18 2015 -0400
@@ -62,7 +62,7 @@
     parser.add_argument( '--fasta_dbkey', dest='fasta_dbkey', action='store', type=str, default=None )
     parser.add_argument( '--fasta_description', dest='fasta_description', action='store', type=str, default=None )
     parser.add_argument( '--data_table_name', dest='data_table_name', action='store', type=str, default='hisat2_indexes' )
-    parser.add_argument( '--indexer_options', dest='indexer_options', action='store', type=str, required=True, default=None )
+    parser.add_argument( '--indexer_options', dest='indexer_options', action='store', type=str, default=None )
     options = parser.parse_args()
 
     filename = options.output