Mercurial > repos > iuc > data_manager_humann2_database_downloader

comparison data_manager_conf.xml @ 0:048593e41359 draft

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planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/data_managers/data_manager_humann2_database_downloader commit 3e179ac4ab2051414320b3811540dfc9b0966061
author iuc
date Sun, 12 Mar 2017 14:33:34 -0400
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-1:000000000000 0:048593e41359
1 <?xml version="1.0"?>
2 <data_managers>
3 <data_manager tool_file="data_manager/data_manager_humann2_download.xml" id="data_manager_humann2_download" >
4 <data_table name="humann2_nucleotide_database"> <!-- Defines a Data Table to be modified. -->
5 <output> <!-- Handle the output of the Data Manager Tool -->
6 <column name="value" /> <!-- columns that are going to be specified by the Data Manager Tool -->
7 <column name="name" /> <!-- columns that are going to be specified by the Data Manager Tool -->
8 <column name="dbkey" /> <!-- columns that are going to be specified by the Data Manager Tool -->
9 <column name="path" output_ref="out_file" >
10 <move type="directory">
11 <source>${path}</source>
12 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">humann2/data/nucleotide_database/${dbkey}</target>
13 </move>
14 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/humann2/data/nucleotide_database/${dbkey}</value_translation>
15 </column>
16 </output>
17 </data_table>
18 <data_table name="humann2_protein_database"> <!-- Defines a Data Table to be modified. -->
19 <output> <!-- Handle the output of the Data Manager Tool -->
20 <column name="value" /> <!-- columns that are going to be specified by the Data Manager Tool -->
21 <column name="name" /> <!-- columns that are going to be specified by the Data Manager Tool -->
22 <column name="dbkey" /> <!-- columns that are going to be specified by the Data Manager Tool -->
23 <column name="path" output_ref="out_file" >
24 <move type="directory">
25 <source>${path}</source>
26 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">humann2/data/protein_database/${dbkey}</target>
27 </move>
28 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/humann2/data/protein_database/${dbkey}</value_translation>
29 </column>
30 </output>
31 </data_table>
32 </data_manager>
33 </data_managers>
34