Mercurial > repos > iuc > data_manager_interproscan

diff data_manager/interproscan.xml @ 3:0df47f8552f6 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_interproscan commit 01e8e726d711c0685f46d3146e4fe0f2a1306036
author iuc
date Wed, 07 Dec 2022 13:41:38 +0000
parents 7776cb18fdf8
children
line wrap: on
line diff
--- a/data_manager/interproscan.xml	Tue Feb 01 17:56:03 2022 +0000
+++ b/data_manager/interproscan.xml	Wed Dec 07 13:41:38 2022 +0000
@@ -1,6 +1,6 @@
-<tool id="data_manager_interproscan" name="InterProScan data manager" version="0.0.2" tool_type="manage_data" profile="20.01">
+<tool id="data_manager_interproscan" name="InterProScan data manager" version="0.0.3" tool_type="manage_data" profile="20.01">
     <requirements>
-        <requirement type="package" version="5.54-87.0">interproscan</requirement>
+        <requirement type="package" version="5.59-91.0">interproscan</requirement>
         <requirement type="package" version="2.26.0">requests</requirement>
         <!-- Forcing an old hmmer version for indexing due to https://github.com/ebi-pf-team/interproscan/issues/232 -->
         <requirement type="package" version="3.1b2">hmmer</requirement>
@@ -15,7 +15,7 @@
     <inputs>
         <param name="partial_data" type="hidden" value="" help="Used for testing"/>
         <param name="version" type="text" value="" label="Version to download" help="Leave empty to download the latest version">
-            <validator type="regex" message="Version must be a valid InterProScan version (e.g. 5.52-86.0)">^([0-9]+\.[0-9]+-[0-9]+\.[0-9]+)?$</validator>
+            <validator type="regex" message="Version must be a valid InterProScan version (e.g. 5.59-91.0)">^([0-9]+\.[0-9]+-[0-9]+\.[0-9]+)?$</validator>
         </param>
     </inputs>
     <outputs>
@@ -31,26 +31,31 @@
                 </assert_contents>
             </output>
             <assert_stdout>
-                <has_text text="Pressed and indexed" />
-                <has_text text="Completed indexing the hmm models" />
+                <has_text text="Finished." />
             </assert_stdout>
         </test>
         <test>
             <param name="partial_data" value="--partial"/>
-            <param name="version" value="5.51-85.0"/>
+            <param name="version" value="5.58-91.0"/>
             <output name="output_file">
                 <assert_contents>
-                    <has_text text="InterProScan 5.51-85.0"/>
-                    <has_text text='"interproscan_version": "5.51-85.0'/>
+                    <has_text text="InterProScan 5.58-91.0"/>
+                    <has_text text='"interproscan_version": "5.58-91.0'/>
                 </assert_contents>
             </output>
             <assert_stdout>
-                <has_text text="Pressed and indexed" />
-                <has_text text="Completed indexing the hmm models" />
+                <has_text text="Finished." />
             </assert_stdout>
         </test>
         <test expect_failure="true">
             <param name="partial_data" value="--partial"/>
+            <param name="version" value="5.51-85.0"/>
+            <assert_stderr>
+                <has_text text="Sorry, this data manager can only download data for InterProScan >= 5.58-91.0. Use the 0.0.2 version for older versions of InterProScan." />
+            </assert_stderr>
+        </test>
+        <test expect_failure="true">
+            <param name="partial_data" value="--partial"/>
             <param name="version" value="xxxx"/>
             <assert_stderr>
                 <has_text text="Version must be a valid InterProScan version" />