Mercurial > repos > iuc > data_manager_manual

comparison data_manager/data_manager_manual.py @ 8:6a6a2e4cc222 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_manual commit dddd6cf3ff59f2a877d03930fcf0563240fb40d8"
author iuc
date Wed, 06 Jan 2021 14:16:00 +0000
parents 2445a874543a
children
comparison
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7:2445a874543a 8:6a6a2e4cc222
56 data_table_filename = data_table.get_filename_for_source(data_manager, None) 56 data_table_filename = data_table.get_filename_for_source(data_manager, None)
57 if not data_table_filename: 57 if not data_table_filename:
58 if tdtm is None: 58 if tdtm is None:
59 from tool_shed.tools import data_table_manager 59 from tool_shed.tools import data_table_manager
60 tdtm = data_table_manager.ToolDataTableManager(app) 60 tdtm = data_table_manager.ToolDataTableManager(app)
61 target_dir, tool_path, relative_target_dir = tdtm.get_target_install_dir(tool_shed_repository) 61 target_dir = tool_shed_repository.repo_path(app)
62 # Dynamically add this data table 62 # Dynamically add this data table
63 log.debug("Attempting to dynamically create a missing Tool Data Table named %s." % data_table_name) 63 log.debug("Attempting to dynamically create a missing Tool Data Table named %s." % data_table_name)
64 repo_info = tdtm.generate_repository_info_elem_from_repository(tool_shed_repository, parent_elem=None) 64 repo_info = tdtm.generate_repository_info_elem_from_repository(tool_shed_repository, parent_elem=None)
65 if repo_info is not None: 65 if repo_info is not None:
66 repo_info = tostring(repo_info) 66 repo_info = tostring(repo_info)