Mercurial > repos > iuc > data_manager_metaphlan2_database_downloader
annotate data_manager_conf.xml @ 1:83f07f40b200 draft default tip
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan2_database_downloader commit 02d2967f77e3fa5a18aea63dc84aa9ab418dc165"
| author | iuc |
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| date | Sun, 22 Nov 2020 12:51:11 +0000 |
| parents | 9c4ad82be5bd |
| children |
| rev | line source |
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9c4ad82be5bd
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan2_database_downloader commit 345fb7ef485456ae833be5ad2d2ce4f8765652c8
iuc
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1 <?xml version="1.0"?> |
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9c4ad82be5bd
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan2_database_downloader commit 345fb7ef485456ae833be5ad2d2ce4f8765652c8
iuc
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changeset
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2 <data_managers> |
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9c4ad82be5bd
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan2_database_downloader commit 345fb7ef485456ae833be5ad2d2ce4f8765652c8
iuc
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3 <data_manager tool_file="data_manager/data_manager_metaphlan2_download.xml" id="data_manager_metaphlan2_download" > |
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9c4ad82be5bd
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan2_database_downloader commit 345fb7ef485456ae833be5ad2d2ce4f8765652c8
iuc
parents:
diff
changeset
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4 <data_table name="metaphlan2_database"> <!-- Defines a Data Table to be modified. --> |
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9c4ad82be5bd
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan2_database_downloader commit 345fb7ef485456ae833be5ad2d2ce4f8765652c8
iuc
parents:
diff
changeset
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5 <output> <!-- Handle the output of the Data Manager Tool --> |
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9c4ad82be5bd
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan2_database_downloader commit 345fb7ef485456ae833be5ad2d2ce4f8765652c8
iuc
parents:
diff
changeset
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6 <column name="value" /> <!-- columns that are going to be specified by the Data Manager Tool --> |
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9c4ad82be5bd
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan2_database_downloader commit 345fb7ef485456ae833be5ad2d2ce4f8765652c8
iuc
parents:
diff
changeset
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7 <column name="name" /> <!-- columns that are going to be specified by the Data Manager Tool --> |
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9c4ad82be5bd
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan2_database_downloader commit 345fb7ef485456ae833be5ad2d2ce4f8765652c8
iuc
parents:
diff
changeset
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8 <column name="dbkey" /> <!-- columns that are going to be specified by the Data Manager Tool --> |
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9c4ad82be5bd
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan2_database_downloader commit 345fb7ef485456ae833be5ad2d2ce4f8765652c8
iuc
parents:
diff
changeset
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9 <column name="path" output_ref="out_file" > |
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9c4ad82be5bd
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan2_database_downloader commit 345fb7ef485456ae833be5ad2d2ce4f8765652c8
iuc
parents:
diff
changeset
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10 <move type="directory"> |
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9c4ad82be5bd
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan2_database_downloader commit 345fb7ef485456ae833be5ad2d2ce4f8765652c8
iuc
parents:
diff
changeset
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11 <source>${path}</source> |
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9c4ad82be5bd
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan2_database_downloader commit 345fb7ef485456ae833be5ad2d2ce4f8765652c8
iuc
parents:
diff
changeset
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12 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">metaphlan2/data/${dbkey}</target> |
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9c4ad82be5bd
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan2_database_downloader commit 345fb7ef485456ae833be5ad2d2ce4f8765652c8
iuc
parents:
diff
changeset
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13 </move> |
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9c4ad82be5bd
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan2_database_downloader commit 345fb7ef485456ae833be5ad2d2ce4f8765652c8
iuc
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diff
changeset
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14 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/metaphlan2/data/${dbkey}</value_translation> |
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9c4ad82be5bd
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan2_database_downloader commit 345fb7ef485456ae833be5ad2d2ce4f8765652c8
iuc
parents:
diff
changeset
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15 <value_translation type="function">abspath</value_translation> |
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9c4ad82be5bd
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan2_database_downloader commit 345fb7ef485456ae833be5ad2d2ce4f8765652c8
iuc
parents:
diff
changeset
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16 </column> |
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9c4ad82be5bd
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan2_database_downloader commit 345fb7ef485456ae833be5ad2d2ce4f8765652c8
iuc
parents:
diff
changeset
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17 </output> |
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9c4ad82be5bd
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan2_database_downloader commit 345fb7ef485456ae833be5ad2d2ce4f8765652c8
iuc
parents:
diff
changeset
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18 </data_table> |
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9c4ad82be5bd
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan2_database_downloader commit 345fb7ef485456ae833be5ad2d2ce4f8765652c8
iuc
parents:
diff
changeset
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19 </data_manager> |
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9c4ad82be5bd
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan2_database_downloader commit 345fb7ef485456ae833be5ad2d2ce4f8765652c8
iuc
parents:
diff
changeset
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20 </data_managers> |
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9c4ad82be5bd
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan2_database_downloader commit 345fb7ef485456ae833be5ad2d2ce4f8765652c8
iuc
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21 |