Mercurial > repos > iuc > data_manager_nextclade

changeset 1:c8b67693199e draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_nextclade commit 0617f25cbfdca61240f16b85ae21f3cd46b1a44e
author iuc
date Sat, 06 Aug 2022 15:44:04 +0000
parents 4de9e77bcc9e
children
files test-data/nextclade.loc tool-data/nextclade.loc
diffstat 2 files changed, 9 insertions(+), 5 deletions(-) [+]
line wrap: on
line diff
--- a/test-data/nextclade.loc	Sat Jul 30 08:09:42 2022 +0000
+++ b/test-data/nextclade.loc	Sat Aug 06 15:44:04 2022 +0000
@@ -1,10 +1,12 @@
 # this is a tab separated file describing the location of nextclade databases used for the
-# pangolin SARS-CoV-2 lineage typing tool
+# nextclade viral lineage typing tool
 #
 # the columns are:
 # value  database_name	description min_nextclade_version       date    path
 #
-# min_pangolin_version is the minimum pangolin tool major version that is needed to read the pangolin_data
+# min_nextclade_version is the minimum nextclade tool major version that is needed to read the nextclade data
+#
+# the database_name refers to which dataset names that, in general, align with species names. for more details see the output of "nextclade dataset list"
 #
 # for example
 #sars-cov-2_2022-06-14T12:00:00Z	sars-cov-2	SARS-CoV-2	1.10.0	2022-06-14T12:00:00	/srv/galaxy/tool-data/nextclade/sars-cov-2_2022-06-14T12-00-00Z
--- a/tool-data/nextclade.loc	Sat Jul 30 08:09:42 2022 +0000
+++ b/tool-data/nextclade.loc	Sat Aug 06 15:44:04 2022 +0000
@@ -1,10 +1,12 @@
-# this is a tab separated file describing the location of pangolin_data databases used for the
-# pangolin SARS-CoV-2 lineage typing tool
+# this is a tab separated file describing the location of nextclade databases used for the
+# nextclade viral lineage typing tool
 #
 # the columns are:
 # value  database_name	description min_nextclade_version       date    path
 #
-# min_pangolin_version is the minimum pangolin tool major version that is needed to read the pangolin_data
+# min_nextclade_version is the minimum nextclade tool major version that is needed to read the nextclade data
+#
+# the database_name refers to which dataset names that, in general, align with species names. for more details see the output of "nextclade dataset list"
 #
 # for example
 #sars-cov-2_2022-06-14T12:00:00Z	sars-cov-2	SARS-CoV-2	1.10.0	2022-06-14T12:00:00	/srv/galaxy/tool-data/nextclade/sars-cov-2_2022-06-14T12-00-00Z