Mercurial > repos > iuc > data_manager_pangolin_data
diff data_manager_conf.xml @ 0:33158d21324d draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_pangolin_data commit 902cce06e30ffe8ccba5dc0c3b704eb39fb4c611
| author | iuc |
|---|---|
| date | Wed, 20 Jul 2022 21:02:43 +0000 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/data_manager_conf.xml Wed Jul 20 21:02:43 2022 +0000 @@ -0,0 +1,56 @@ +<?xml version="1.0"?> +<data_managers> + <data_manager tool_file="data_manager/pangolin_data_dm.xml" id="data_manager_pangolin_data"> + <data_table name="pangolin_data"> + <output> + <column name="value" /> + <column name="description" /> + <column name="min_pangolin_version" /> + <column name="date" /> + <column name="path" output_ref="output_file" > + <!-- note: the Python script sanitises the possibly user-supplied scheme name ('value') --> + <move type="directory" relativize_symlinks="True"> + <source>${path}</source> + <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">pangolin_data/#echo str($value)#</target> + </move> + <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/pangolin_data/#echo str($value)#</value_translation> + <value_translation type="function">abspath</value_translation> + </column> + </output> + </data_table> + <data_table name="pangolin_constellations"> + <output> + <column name="value" /> + <column name="description" /> + <column name="min_scorpio_version" /> + <column name="date" /> + <column name="path" output_ref="output_file" > + <!-- note: the Python script sanitises the possibly user-supplied scheme name ('value') --> + <move type="directory" relativize_symlinks="True"> + <source>${path}</source> + <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">pangolin_constellations/#echo str($value)#</target> + </move> + <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/pangolin_constellations/#echo str($value)#</value_translation> + <value_translation type="function">abspath</value_translation> + </column> + </output> + </data_table> + <data_table name="pangolin_assignment"> + <output> + <column name="value" /> + <column name="description" /> + <column name="min_pangolin_version" /> + <column name="date" /> + <column name="path" output_ref="output_file" > + <!-- note: the Python script sanitises the possibly user-supplied scheme name ('value') --> + <move type="directory" relativize_symlinks="True"> + <source>${path}</source> + <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">pangolin_assignment/#echo str($value)#</target> + </move> + <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/pangolin_assignment/#echo str($value)#</value_translation> + <value_translation type="function">abspath</value_translation> + </column> + </output> + </data_table> + </data_manager> +</data_managers>