diff data_manager_conf.xml @ 0:33158d21324d draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_pangolin_data commit 902cce06e30ffe8ccba5dc0c3b704eb39fb4c611
author iuc
date Wed, 20 Jul 2022 21:02:43 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/data_manager_conf.xml	Wed Jul 20 21:02:43 2022 +0000
@@ -0,0 +1,56 @@
+<?xml version="1.0"?>
+<data_managers>    
+    <data_manager tool_file="data_manager/pangolin_data_dm.xml" id="data_manager_pangolin_data">
+        <data_table name="pangolin_data">
+            <output>
+                <column name="value" />
+                <column name="description" />
+                <column name="min_pangolin_version" />
+                <column name="date" />
+                <column name="path" output_ref="output_file" >
+                    <!-- note: the Python script sanitises the possibly user-supplied scheme name ('value') -->
+                    <move type="directory" relativize_symlinks="True">
+                        <source>${path}</source>
+                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">pangolin_data/#echo str($value)#</target>
+                    </move>
+                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/pangolin_data/#echo str($value)#</value_translation>
+                    <value_translation type="function">abspath</value_translation>
+                </column>
+            </output>
+        </data_table>
+        <data_table name="pangolin_constellations">
+            <output>
+                <column name="value" />
+                <column name="description" />
+                <column name="min_scorpio_version" />
+                <column name="date" />
+                <column name="path" output_ref="output_file" >
+                    <!-- note: the Python script sanitises the possibly user-supplied scheme name ('value') -->
+                    <move type="directory" relativize_symlinks="True">
+                        <source>${path}</source>
+                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">pangolin_constellations/#echo str($value)#</target>
+                    </move>
+                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/pangolin_constellations/#echo str($value)#</value_translation>
+                    <value_translation type="function">abspath</value_translation>
+                </column>
+            </output>
+        </data_table>
+        <data_table name="pangolin_assignment">
+            <output>
+                <column name="value" />
+                <column name="description" />
+                <column name="min_pangolin_version" />
+                <column name="date" />
+                <column name="path" output_ref="output_file" >
+                    <!-- note: the Python script sanitises the possibly user-supplied scheme name ('value') -->
+                    <move type="directory" relativize_symlinks="True">
+                        <source>${path}</source>
+                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">pangolin_assignment/#echo str($value)#</target>
+                    </move>
+                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/pangolin_assignment/#echo str($value)#</value_translation>
+                    <value_translation type="function">abspath</value_translation>
+                </column>
+            </output>
+        </data_table>
+    </data_manager>
+</data_managers>