view data_manager_conf.xml @ 1:c22f6c820658 draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_pangolin_data commit 544fd499de5324afce8f5f9b38ffdaf282f4dfaa
author iuc
date Wed, 25 Sep 2024 15:42:43 +0000
parents 33158d21324d
children
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<?xml version="1.0"?>
<data_managers>    
    <data_manager tool_file="data_manager/pangolin_data_dm.xml" id="data_manager_pangolin_data">
        <data_table name="pangolin_data">
            <output>
                <column name="value" />
                <column name="description" />
                <column name="min_pangolin_version" />
                <column name="date" />
                <column name="path" output_ref="output_file" >
                    <!-- note: the Python script sanitises the possibly user-supplied scheme name ('value') -->
                    <move type="directory" relativize_symlinks="True">
                        <source>${path}</source>
                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">pangolin_data/#echo str($value)#</target>
                    </move>
                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/pangolin_data/#echo str($value)#</value_translation>
                    <value_translation type="function">abspath</value_translation>
                </column>
            </output>
        </data_table>
        <data_table name="pangolin_constellations">
            <output>
                <column name="value" />
                <column name="description" />
                <column name="min_scorpio_version" />
                <column name="date" />
                <column name="path" output_ref="output_file" >
                    <!-- note: the Python script sanitises the possibly user-supplied scheme name ('value') -->
                    <move type="directory" relativize_symlinks="True">
                        <source>${path}</source>
                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">pangolin_constellations/#echo str($value)#</target>
                    </move>
                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/pangolin_constellations/#echo str($value)#</value_translation>
                    <value_translation type="function">abspath</value_translation>
                </column>
            </output>
        </data_table>
        <data_table name="pangolin_assignment">
            <output>
                <column name="value" />
                <column name="description" />
                <column name="min_pangolin_version" />
                <column name="date" />
                <column name="path" output_ref="output_file" >
                    <!-- note: the Python script sanitises the possibly user-supplied scheme name ('value') -->
                    <move type="directory" relativize_symlinks="True">
                        <source>${path}</source>
                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">pangolin_assignment/#echo str($value)#</target>
                    </move>
                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/pangolin_assignment/#echo str($value)#</value_translation>
                    <value_translation type="function">abspath</value_translation>
                </column>
            </output>
        </data_table>
    </data_manager>
</data_managers>