Mercurial > repos > iuc > data_manager_pharokka

diff data_manager_conf.xml @ 0:97f310b8e308 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_pharokka_database_fetcher/ commit 31e99045208605780b3fe4b89a999137adcabe13
author iuc
date Thu, 20 Apr 2023 07:51:43 +0000
parents
children 50caca83e7c9
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/data_manager_conf.xml	Thu Apr 20 07:51:43 2023 +0000
@@ -0,0 +1,23 @@
+<?xml version="1.0"?>
+<data_managers>
+
+    <data_manager tool_file="data_manager/pharokka_db_fetcher.xml" id="pharokka_db_fetcher" version="1.2">
+        <data_table name="pharokka_db">
+            <output>
+                <column name="value" />
+                <column name="dbkey" />
+                <column name="version" />
+                <column name="name" />
+                <column name="path" output_ref="out_file" >
+                    <move type="directory" relativize_symlinks="True">
+                        <source>${path}</source>
+                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">pharokka_database/${value}</target>
+                    </move>
+                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/pharokka_database/${value}</value_translation>
+                    <value_translation type="function">abspath</value_translation>
+                </column>
+            </output>
+        </data_table>
+    </data_manager>
+
+</data_managers>