Mercurial > repos > iuc > data_manager_primer_scheme_bedfiles
annotate test-data/primer_scheme_bedfiles.loc @ 4:157a5c9ea72a draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_primer_scheme_bedfiles commit 02d2967f77e3fa5a18aea63dc84aa9ab418dc165"
| author | iuc |
|---|---|
| date | Sun, 22 Nov 2020 12:52:52 +0000 |
| parents | b3710e492ee4 |
| children | dd451e45681c |
| rev | line source |
|---|---|
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b3710e492ee4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_primer_scheme_bedfiles commit 61b727022bd1b24a8843830a9c5f34ef66835694"
iuc
parents:
diff
changeset
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1 # this is a tab separated file describing the location of primer schemes used for amplicon |
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b3710e492ee4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_primer_scheme_bedfiles commit 61b727022bd1b24a8843830a9c5f34ef66835694"
iuc
parents:
diff
changeset
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2 # sequencing (e.g. using the ARTIC SARS-CoV-2 protocol) |
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b3710e492ee4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_primer_scheme_bedfiles commit 61b727022bd1b24a8843830a9c5f34ef66835694"
iuc
parents:
diff
changeset
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3 # |
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b3710e492ee4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_primer_scheme_bedfiles commit 61b727022bd1b24a8843830a9c5f34ef66835694"
iuc
parents:
diff
changeset
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4 # the columns are: |
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b3710e492ee4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_primer_scheme_bedfiles commit 61b727022bd1b24a8843830a9c5f34ef66835694"
iuc
parents:
diff
changeset
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5 # value description path |
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b3710e492ee4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_primer_scheme_bedfiles commit 61b727022bd1b24a8843830a9c5f34ef66835694"
iuc
parents:
diff
changeset
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6 # |
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b3710e492ee4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_primer_scheme_bedfiles commit 61b727022bd1b24a8843830a9c5f34ef66835694"
iuc
parents:
diff
changeset
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7 # for example |
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b3710e492ee4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_primer_scheme_bedfiles commit 61b727022bd1b24a8843830a9c5f34ef66835694"
iuc
parents:
diff
changeset
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8 # SARS-CoV-2-ARTICv1 SARS-CoV-2 ARTIC v1 primers /data/galaxy/tool_data/artic_primers/SARS-CoV-2-ARTICv1.bed |
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b3710e492ee4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_primer_scheme_bedfiles commit 61b727022bd1b24a8843830a9c5f34ef66835694"
iuc
parents:
diff
changeset
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9 SARS-CoV-2-ARTICv3 SARS-CoV-2-ARTIC v3 primer set /tmp/tmpYMFYgd/tmpdHhY2S/tmppwFSVU/database/data_manager_tool-dataI2hi9i/primer_scheme_bedfiles/SARS-CoV-2-ARTICv3.bed |
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b3710e492ee4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_primer_scheme_bedfiles commit 61b727022bd1b24a8843830a9c5f34ef66835694"
iuc
parents:
diff
changeset
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10 SARS-CoV-2-ARTICv2 SARS-CoV-2-ARTIC v2 primer set /tmp/tmpYMFYgd/tmpdHhY2S/tmppwFSVU/database/data_manager_tool-dataI2hi9i/primer_scheme_bedfiles/SARS-CoV-2-ARTICv2.bed |
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b3710e492ee4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_primer_scheme_bedfiles commit 61b727022bd1b24a8843830a9c5f34ef66835694"
iuc
parents:
diff
changeset
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11 SARS-CoV-2-ARTICv1 SARS-CoV-2-ARTIC v1 primer set /tmp/tmpYMFYgd/tmpdHhY2S/tmppwFSVU/database/data_manager_tool-dataI2hi9i/primer_scheme_bedfiles/SARS-CoV-2-ARTICv1.bed |
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b3710e492ee4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_primer_scheme_bedfiles commit 61b727022bd1b24a8843830a9c5f34ef66835694"
iuc
parents:
diff
changeset
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12 sample_primer sample primer scheme /tmp/tmpYMFYgd/tmpdHhY2S/tmppwFSVU/database/data_manager_tool-dataI2hi9i/primer_scheme_bedfiles/sample_primer.bed |