Mercurial > repos > iuc > data_manager_snpeff
changeset 6:2107b4f40945 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_snpeff commit e32db0704e23d58358f749177988d2cb5f01c708
| author | iuc |
|---|---|
| date | Tue, 18 Apr 2017 12:56:13 -0400 |
| parents | 3d9dd4b9fb09 |
| children | a6400027d849 |
| files | data_manager/data_manager_snpEff_databases.py |
| diffstat | 1 files changed, 2 insertions(+), 2 deletions(-) [+] |
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--- a/data_manager/data_manager_snpEff_databases.py Tue Apr 18 09:40:03 2017 -0400 +++ b/data_manager/data_manager_snpEff_databases.py Tue Apr 18 12:56:13 2017 -0400 @@ -17,7 +17,7 @@ sys.exit( return_code ) databases_output.close() data_manager_dict['data_tables'] = data_manager_dict.get( 'data_tables', {} ) - data_manager_dict['data_tables']['snpeff4_databases'] = data_manager_dict['data_tables'].get( 'snpeff4_databases', [] ) + data_manager_dict['data_tables']['snpeffv_databases'] = data_manager_dict['data_tables'].get( 'snpeffv_databases', [] ) data_table_entries = [] with open(databases_path, 'r') as fh: for i, line in enumerate(fh): @@ -31,7 +31,7 @@ continue description = fields[1].strip() + ' : ' + genome_version data_table_entries.append(dict(value=genome_version, name=description)) - data_manager_dict['data_tables']['snpeff4_databases'] = data_table_entries + data_manager_dict['data_tables']['snpeffv_databases'] = data_table_entries return data_manager_dict