Mercurial > repos > iuc > data_manager_snpsift_dbnsfp

diff data_manager/data_manager_snpsift_dbnsfp.xml @ 6:e57f0b0bc73b draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_snpsift_dbnsfp commit 57f71aa633a43ab02bbf05acd0c6d7f406e01f1e"
author iuc
date Thu, 28 Nov 2019 15:48:39 -0500
parents 47f276ffcbfc
children
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line diff
--- a/data_manager/data_manager_snpsift_dbnsfp.xml	Tue Oct 30 18:44:43 2018 -0400
+++ b/data_manager/data_manager_snpsift_dbnsfp.xml	Thu Nov 28 15:48:39 2019 -0500
@@ -1,15 +1,16 @@
-<tool id="data_manager_snpsift_dbnsfp" name="SnpSift dbNSFP" version="4.1.0" tool_type="manage_data">
+<tool id="data_manager_snpsift_dbnsfp" name="SnpSift dbNSFP" version="4.1.1" tool_type="manage_data" profile="19.05">
     <description>Install a dbNSFP variant annotation database</description>
     <requirements>
         <requirement type="package" version="0.8.3">pysam</requirement>
+        <requirement type="package" version="2.7">python</requirement>
     </requirements>
     <stdio>
         <exit_code range=":-1"  level="fatal"   description="Error: Cannot open file" />
         <exit_code range="1:"  level="fatal"   description="Error" />
     </stdio>
-    <command interpreter="python">
+    <command>
         #import re
-        data_manager_snpsift_dbnsfp.py
+        python '$__tool_directory__/data_manager_snpsift_dbnsfp.py'
         #if $db.src == 'softgenetics':
             --softgenetics "$db.softgenetics_name"
         #elif $db.src == 'history':