Mercurial > repos > iuc > data_manager_star_index_builder

comparison tool_data_table_conf.xml.sample @ 5:f5eb9afa8f8a draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_star_index_builder commit 9b68f6ae375aed38493f8399b8572347c750336d
author iuc
date Thu, 15 Aug 2019 11:30:16 -0400
parents f537d3e00eb8
children 6c6c6df09e64
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4:6ef6520f14fc 5:f5eb9afa8f8a
2 <!-- Locations of all fasta files under genome directory --> 2 <!-- Locations of all fasta files under genome directory -->
3 <table name="all_fasta" comment_char="#" allow_duplicate_entries="False"> 3 <table name="all_fasta" comment_char="#" allow_duplicate_entries="False">
4 <columns>value, dbkey, name, path</columns> 4 <columns>value, dbkey, name, path</columns>
5 <file path="tool-data/all_fasta.loc" /> 5 <file path="tool-data/all_fasta.loc" />
6 </table> 6 </table>
7 <!-- Locations of indexes in the BWA mapper format --> 7 <!-- Locations of STAR indexes -->
8 <table name="rnastar_index2" comment_char="#" allow_duplicate_entries="False"> 8 <table name="rnastar_index2_versioned" comment_char="#" allow_duplicate_entries="False">
9 <columns>value, dbkey, name, path, with-gtf</columns> 9 <columns>value, dbkey, name, path, with_gene_model, version</columns>
10 <file path="tool-data/rnastar_index2.loc" /> 10 <file path="tool-data/rnastar_index2_versioned.loc" />
11 </table> 11 </table>
12 </tables> 12 </tables>