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comparison data_manager_conf.xml @ 12:71c994a11f71 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_star_index_builder commit 57d05675396f0b44265fb4dbc8f9f891c6073219
author iuc
date Thu, 05 Dec 2024 06:49:40 +0000
parents d63c1442407f
children
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11:d63c1442407f 12:71c994a11f71
10 <move type="directory" relativize_symlinks="True"> 10 <move type="directory" relativize_symlinks="True">
11 <!-- <source>${path}</source> 11 <!-- <source>${path}</source>
12 out_file.extra_files_path is used as base by default 12 out_file.extra_files_path is used as base by default
13 if no source, eg for type=directory, then refers to base 13 if no source, eg for type=directory, then refers to base
14 --> 14 -->
15 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">rnastar/${version}/${dbkey}/${value}/${path}</target> 15 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">genomes/${dbkey}/rnastar_index/v${version}/${value}</target>
16 </move> 16 </move>
17 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/rnastar/${version}/${dbkey}/${value}/${path}</value_translation> 17 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/genomes/${dbkey}/rnastar_index/v${version}/${value}</value_translation>
18 <value_translation type="function">abspath</value_translation> 18 <value_translation type="function">abspath</value_translation>
19 </column> 19 </column>
20 <column name="with_gene_model" /> 20 <column name="with_gene_model" />
21 <column name="version" /> 21 <column name="version" />
22 </output> 22 </output>