Mercurial > repos > iuc > data_source_iris_tcga
changeset 0:4e4ab7e7387a draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/data_source_iris_tcga commit d46d41c5fec10407bd6b5cb77a11d9b43b82b95e
| author | iuc |
|---|---|
| date | Fri, 23 Sep 2016 12:14:25 -0400 |
| parents | |
| children | 588beeb9f0d3 |
| files | iris_tcga.xml tool_dependencies.xml |
| diffstat | 2 files changed, 30 insertions(+), 0 deletions(-) [+] |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/iris_tcga.xml Fri Sep 23 12:14:25 2016 -0400 @@ -0,0 +1,21 @@ +<?xml version="1.0"?> +<tool name="IRIS-TCGA" id="data_source_iris_tcga" tool_type="data_source" hidden="False" display_interface="False" version="1.0.0" force_history_refresh="True"> + <description>server</description> + <requirements> + <requirement type="package" version="2.7.10">python</requirement> + <requirement type="package" version="1.0.0">galaxy_json_data_source</requirement> + </requirements> + <stdio> + <exit_code range="1:" /> + <exit_code range=":-1" /> + </stdio> + <version_command>json_data_source.py --version</version_command> + <command>json_data_source.py "${__app__.config.output_size_limit}" --json_param_file "${output1}" --path "."</command> + <inputs check_values="False" action="http://bioinf.iasi.cnr.it/iristcga/services_workspace/services/iris_tcga/main.php" > + <param name="URL" type="hidden" value="" /> + </inputs> + <outputs> + <data format="auto" name="output1" /> + </outputs> + <options sanitize="False" refresh="True"/> +</tool>
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Fri Sep 23 12:14:25 2016 -0400 @@ -0,0 +1,9 @@ +<?xml version="1.0"?> +<tool_dependency> + <package name="python" version="2.7.10"> + <repository changeset_revision="0339c4a9b87b" name="package_python_2_7_10" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" /> + </package> + <package name="galaxy_json_data_source" version="1.0.0"> + <repository changeset_revision="5ea54764a6b9" name="package_galaxy_json_data_source" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" /> + </package> +</tool_dependency>