Mercurial > repos > iuc > datamash_ops

comparison datamash-ops.xml @ 1:2f3c6f2dcf39 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 5a6df0b54ca66fb588886b4610bbd837cd624fed
author iuc
date Wed, 21 Sep 2016 21:44:29 -0400
parents c4611129661b
children 562f3c677828
comparison
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0:c4611129661b 1:2f3c6f2dcf39
32 <param falsevalue="" help="--header-out" label="Print header line" name="header_out" truevalue="--header-out" type="boolean" /> 32 <param falsevalue="" help="--header-out" label="Print header line" name="header_out" truevalue="--header-out" type="boolean" />
33 <param falsevalue="" help="--sort" label="Sort input" name="need_sort" truevalue="--sort" type="boolean" /> 33 <param falsevalue="" help="--sort" label="Sort input" name="need_sort" truevalue="--sort" type="boolean" />
34 <param falsevalue="" help="--full" label="Print all fields from input file" name="print_full_line" truevalue="--full" type="boolean" /> 34 <param falsevalue="" help="--full" label="Print all fields from input file" name="print_full_line" truevalue="--full" type="boolean" />
35 <param falsevalue="" help="--ignore-case" label="Ignore case when grouping" name="ignore_case" truevalue="--ignore-case" type="boolean" /> 35 <param falsevalue="" help="--ignore-case" label="Ignore case when grouping" name="ignore_case" truevalue="--ignore-case" type="boolean" />
36 <repeat default="1" min="1" name="operations" title="Operation to perform on each group"> 36 <repeat default="1" min="1" name="operations" title="Operation to perform on each group">
37 <param label="Type" name="op_name" type="select"> 37 <param name="op_name" type="select" label="Type">
38 <option value="count">count</option> 38 <option value="count">count</option>
39 <option value="sum">sum</option> 39 <option value="sum">sum</option>
40 <option value="min">minimum</option> 40 <option value="min">minimum</option>
41 <option value="max">maximum</option> 41 <option value="max">maximum</option>
42 <option value="absmin">Absolute minimum</option> 42 <option value="absmin">Absolute minimum</option>
61 <option value="antimode">Anti-Mode</option> 61 <option value="antimode">Anti-Mode</option>
62 <option value="unique">Combine all unique values</option> 62 <option value="unique">Combine all unique values</option>
63 <option value="collapse">Combine all values</option> 63 <option value="collapse">Combine all values</option>
64 <option value="countunique">Count Unique values</option> 64 <option value="countunique">Count Unique values</option>
65 </param> 65 </param>
66 <param data_ref="in_file" label="On column" name="op_column" type="data_column" /> 66 <param name="op_column" data_ref="in_file" label="On column" type="data_column" />
67 </repeat> 67 </repeat>
68 </expand> 68 </expand>
69 <tests> 69 <tests>
70 <test> 70 <test>
71 <param name="in_file" value="group_compute_input.txt" /> 71 <param name="in_file" value="group_compute_input.txt" ftype="tabular" />
72 <param name="grouping" value="2" /> 72 <param name="grouping" value="2" />
73 <param name="header_in" value="true" /> 73 <param name="header_in" value="true" />
74 <param name="header_out" value="true" /> 74 <param name="header_out" value="true" />
75 <param name="need_sort" value="true" /> 75 <param name="need_sort" value="true" />
76 <param name="print_full_line" value="false" /> 76 <param name="print_full_line" value="false" />
77 <param name="op_column" value="3" />
78 <param name="op_name" value="sum" />
79 <param name="ignore_case" value="false" /> 77 <param name="ignore_case" value="false" />
80 <output file="group_compute_output.txt" name="out_file" /> 78 <repeat name="operations">
79 <param name="op_name" value="sum" />
80 <param name="op_column" value="3" />
81 </repeat>
82 <output file="group_compute_output.txt" name="out_file" ftpye="tabular" />
81 </test> 83 </test>
82 </tests> 84 </tests>
83 <help> 85 <help>
84 <![CDATA[ 86 <![CDATA[
85 @HELP_HEADER@ 87 @HELP_HEADER@